RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 CYP17A1P05093 508 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 LPOP22079 712 aaPredicted RBP19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 KCNA4P22459 653 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 ZNF140P52738 457 aaPredicted RBP19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 TAS2R39P59534 338 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 SNRPD1P62314 119 aaKnown RBP19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 RALGPS1Q5JS13 557 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 MBLAC2Q68D91 279 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 KIAA0408Q6ZU52 694 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 CCDC197Q8NCU1 140 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 GABPB2Q8TAK5 448 aaPredicted RBP19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 MYO19Q96H55 970 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 OMDQ99983 421 aa19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 UNKQ9C0B0 810 aaKnown RBP19.24■□□□□ 0.67
TUBB4B-202ENST00000604929 PLIN3O60664 434 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 EDF1O60869 148 aaKnown RBP19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 GSRP00390 522 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 STMN1P16949 149 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 HADHAP40939 763 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 SEMG2Q02383 582 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 OVGP1Q12889 678 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 CHI3L2Q15782 390 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 MYLK3Q32MK0 819 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 EML3Q32P44 896 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 OTOAQ7RTW8 1153 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 METTL3Q86U44 580 aaKnown RBP19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 BPIFB1Q8TDL5 484 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 SMARCD2Q92925 531 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 PEX13Q92968 403 aa19.23■□□□□ 0.67
TUBB4B-202ENST00000604929 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 BPGMP07738 259 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 SLC35E2BP0CK96 405 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ARSAP15289 507 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 POLR2EP19388 210 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CDKN1CP49918 316 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 RAB10P61026 200 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 HYAL1Q12794 435 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 INSCQ1MX18 579 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 FASTKD1Q53R41 847 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 C22orf39Q6P5X5 142 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ZCCHC23Q6ZST2 131 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 SPATA21Q7Z572 469 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 GPR149Q86SP6 731 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 C12orf40Q86WS4 652 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 EID2BQ96D98 161 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CIPCQ9C0C6 399 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ATP13A3Q9H7F0 1226 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ZNF395Q9H8N7 513 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CATSPERZQ9NTU4 200 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 MARK1Q9P0L2 795 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 RUVBL2Q9Y230 463 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 OTOL1A6NHN0 477 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ANKRD65E5RJM6 399 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 STX7O15400 261 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ADH5P11766 374 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 PMLP29590 882 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 GLRBP48167 497 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CSNK1DP48730 415 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 SLC12A2P55011 1212 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CES4AQ5XG92 561 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 MRNIPQ6NTE8 343 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 DPY19L3Q6ZPD9 716 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 Q6ZVU0 165 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 PPP2R3CQ969Q6 453 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 TIFAQ96CG3 184 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CDCA3Q99618 268 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 OLFM1Q99784 485 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 GPR63Q9BZJ6 419 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 FAM96AQ9H5X1 160 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 POLR3BQ9NW08 1133 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 CPSF2Q9P2I0 782 aaKnown RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 FKBPLQ9UIM3 349 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 ACOT9Q9Y305 439 aa19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 USP15Q9Y4E8 981 aaPredicted RBP19.22■□□□□ 0.67
TUBB4B-202ENST00000604929 HEPACAM2A8MVW5 462 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 PROCP04070 461 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 ALDH3A1P30838 453 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 SULT2A1Q06520 285 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 SYCE2Q6PIF2 218 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 LYSMD3Q7Z3D4 306 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 CLEC14AQ86T13 490 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 ZSWIM9Q86XI8 627 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 CNPY4Q8N129 248 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 AHI1Q8N157 1196 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 ANKS4BQ8N8V4 417 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 KCTD4Q8WVF5 259 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 VOPP1Q96AW1 172 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 TSSK1BQ9BXA7 367 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 ZDHHC6Q9H6R6 413 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 RIMKLBQ9ULI2 386 aa19.21■□□□□ 0.67
TUBB4B-202ENST00000604929 HTRA2O43464 458 aaPredicted RBP19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 SERPINA4P29622 427 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 MAPK8P45983 427 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 GRIA4P48058 902 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 DGKGP49619 791 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 CSRP3P50461 194 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 CCNHP51946 323 aaPredicted RBP19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 MESP2Q0VG99 397 aa19.2■□□□□ 0.66
TUBB4B-202ENST00000604929 TAF1BQ53T94 588 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms