RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 TRMT61AQ96FX7 289 aaKnown RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 C16orf45Q96MC5 204 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SPXQ9BT56 116 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CCDC106Q9BWC9 280 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HEMGNQ9BXL5 484 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 GLIS2Q9BZE0 524 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 C1orf21Q9H246 121 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 IKZF4Q9H2S9 585 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 EPHX3Q9H6B9 360 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 FBXO28Q9NVF7 368 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HDAC6Q9UBN7 1215 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 NAP1L2Q9ULW6 460 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 DUSP12Q9UNI6 340 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 PCDHGA5Q9Y5G8 931 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 PCDHGA1Q9Y5H4 931 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SCN11AQ9UI33 1791 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 KIF20BQ96Q89 1820 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 AOX1Q06278 1338 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 COL11A2P13942 1736 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 LRRD1A4D1F6 860 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 NPIPB13A6NJU9 1138 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 NPIPB5A8MRT5 1133 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PRR5-ARHGAP8B1AHC4 643 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PATE3B3GLJ2 98 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 NPIPB4C9JG80 1138 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 K7EPI3 171 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 IFNL4K9M1U5 179 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ZNF263O14978 683 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GPR42O15529 346 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 RNMTO43148 476 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 DIAPH2O60879 1101 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 MFAP3LO75121 409 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 TACC1O75410 805 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 STC2O76061 302 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SEC31AO94979 1220 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 KAT7O95251 611 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 APBB3O95704 486 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 HMOX1P09601 288 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SUPT20HL2P0C7V6 817 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 EPHA3P29320 983 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 HOXA11P31270 313 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PIP4K2AP48426 406 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ARHGAP8P85298 464 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 TLE3Q04726 772 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PIGFQ07326 219 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GOLGA8FQ08AF8 430 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 CSTF3Q12996 717 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GRAPQ13588 217 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PTK6Q13882 451 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 E2F2Q14209 437 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 FRG1Q14331 258 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GRM7Q14831 915 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 C15orf59Q2T9L4 293 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ASTE1Q2TB18 679 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 DPCR1Q3MIW9 517 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SUPT20HL1Q3ZLR7 823 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 RUNDC3AQ59EK9 446 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ARHGAP40Q5TG30 622 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GRHL2Q6ISB3 625 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ERN2Q76MJ5 926 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 GPRIN1Q7Z2K8 1008 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 RABEPKQ7Z6M1 372 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 XYLT1Q86Y38 959 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 RHPN2Q8IUC4 686 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 FAM185AQ8N0U4 392 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SIX6OS1Q8N1H7 587 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SPATA18Q8TC71 538 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 CNOT9Q92600 299 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 FAR2Q96K12 515 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ZNF512Q96ME7 567 aaPredicted RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PAFAH2Q99487 392 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 EIF3CQ99613 913 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 TEX13BQ9BXU2 312 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 ZNF341Q9BYN7 854 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 TASP1Q9H6P5 420 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 IL1RAPL2Q9NP60 686 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 MTMR4Q9NYA4 1195 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 CTTNBP2NLQ9P2B4 639 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 LRIT1Q9P2V4 623 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PEMTQ9UBM1 199 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 KLQ9UEF7 1012 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 PPIEQ9UNP9 301 aaKnown RBP4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 MTMR6Q9Y217 621 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SSX2IPQ9Y2D8 614 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SNX14Q9Y5W7 946 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 IKBKGQ9Y6K9 419 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SLC30A1Q9Y6M5 507 aa4.02□□□□□ -1.77
IGHV3-29-201ENST00000604817 SYNJ2BP-COX16A0A087WUM0 186 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 CYP3A7-CYP3A51PA0A087WV96 503 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 A0A1W2PRV1 198 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 RGSL1A5PLK6 1076 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 ZAR1LA6NP61 321 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 QSOX1O00391 747 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 TRIM24O15164 1050 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 PGRMC2O15173 223 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 PRPF4O43172 522 aaKnown RBP eCLIP4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 SPRY1O43609 319 aaPredicted RBP4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 TLR2O60603 784 aa4.01□□□□□ -1.77
IGHV3-29-201ENST00000604817 SMPD2O60906 423 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms