RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ALPIP09923 528 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 CTPS1P17812 591 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 CES1P23141 567 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 CSNK1DP48730 415 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 SNRPD1P62314 119 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 MGAT5Q09328 741 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 MYLK3Q32MK0 819 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 METTL3Q86U44 580 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PPM1NQ8N819 430 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 HLA-CQ95604 372 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 TACO1Q9BSH4 297 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 DHRS4Q9BTZ2 278 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 TRABDQ9H4I3 376 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 TREX1Q9NSU2 369 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 MCM8Q9UJA3 840 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PSAT1Q9Y617 370 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 TBC1D3BA6NDS4 549 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 HTRA2O43464 458 aaPredicted RBP17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 NARSO43776 548 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 ALDH1A2O94788 518 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 ATP5BP06576 529 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 POLBP06746 335 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 ARSDP51689 593 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 SEMG2Q02383 582 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 BCL2L1Q07817 233 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 ZNF234Q14588 700 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 LRRC73Q5JTD7 316 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 EGFLAMQ63HQ2 1017 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 CTAGE3PQ8IX95 158 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PNPLA1Q8N8W4 532 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 MDGA1Q8NFP4 955 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 OR13J1Q8NGT2 312 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 DCAKDQ8WVC6 231 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PIH1D2Q8WWB5 315 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PTPRN2Q92932 1015 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 CERS2Q96G23 380 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 CYTH2Q99418 400 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PHF7Q9BWX1 381 aaPredicted RBP17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PITPNM3Q9BZ71 974 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 PPCSQ9HAB8 311 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 SENP1Q9P0U3 644 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 KLHL14Q9P2G3 628 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 BAIAP2L1Q9UHR4 511 aa17.41■□□□□ 0.38
PPFIA3-207ENST00000602716 SPAG7O75391 227 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ASLP04424 464 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 UGT2B4P06133 528 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 CCDC15Q0P6D6 951 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 RASA2Q15283 850 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 FNDC3BQ53EP0 1204 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 SPANXN3Q5MJ09 141 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 RGS9BPQ6ZS82 235 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 RASSF3Q86WH2 238 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 NAT9Q9BTE0 207 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ATP13A3Q9H7F0 1226 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 SMG5Q9UPR3 1016 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 WASF2Q9Y6W5 498 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 AP3B1O00203 1094 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 SRPRAP08240 638 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 GSTA2P09210 222 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ALADP13716 330 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 IL9P15248 144 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ADRA1DP25100 572 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ABL2P42684 1182 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 IL12RB1P42701 662 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 METAP1P53582 386 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 SMAD2Q15796 467 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 CNGA3Q16281 694 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 KLHL38Q2WGJ6 581 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 POM121L1PQ3SYA9 428 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 RALGPS1Q5JS13 557 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 HABP4Q5JVS0 413 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 TSTD2Q5T7W7 516 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ARMC12Q5T9G4 340 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ASRGL1Q7L266 308 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 CCNJLQ8IV13 435 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 OR13C4Q8NGS5 318 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 RANBP9Q96S59 729 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 AGAP2Q99490 1192 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 ARHGEF3Q9NR81 526 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 HEBP1Q9NRV9 189 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 SLC24A2Q9UI40 661 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 STARD13Q9Y3M8 1113 aa17.4■□□□□ 0.38
PPFIA3-207ENST00000602716 HEATR9A2RTY3 570 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 MROH6A6NGR9 719 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 ANKRD66B4E2M5 251 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 CTHP32929 405 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 TMPRSS15P98073 1019 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 EIF4HQ15056 248 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 FAM47EQ6ZV65 393 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 SLC44A3Q8N4M1 653 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 SLC44A1Q8WWI5 657 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 KLHL29Q96CT2 875 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 PAIP2Q9BPZ3 127 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 CACNA2D2Q9NY47 1150 aa17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 ARIH1Q9Y4X5 557 aaPredicted RBP17.39■□□□□ 0.37
PPFIA3-207ENST00000602716 ANKRD36A6QL64 1941 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms