RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 LACTB2Q53H82 288 aaPredicted RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 N4BP2L1Q5TBK1 243 aaPredicted RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 ZNF470Q6ECI4 717 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 GET4Q7L5D6 327 aaPredicted RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 PDCD6IPQ8WUM4 868 aaKnown RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 CDKN2AIPNLQ96HQ2 116 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 TCF12Q99081 682 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 ERVW-1Q9UQF0 538 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 MTO1Q9Y2Z2 717 aaKnown RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 ARL5AQ9Y689 179 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 WASH3PC4AMC7 463 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 GOLGA8TH3BQL2 631 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 PLIN3O60664 434 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 CRABP2P29373 138 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 SLC1A2P43004 574 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 RECQLP46063 649 aaPredicted RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 CLCN5P51795 746 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 POU4F1Q01851 419 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 DLG2Q15700 870 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 AFTPHQ6ULP2 937 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 CMC1Q7Z7K0 106 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 CILP2Q8IUL8 1156 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 NUDCD3Q8IVD9 361 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 RYBPQ8N488 228 aaPredicted RBP20.09■□□□□ 0.81
PNKP-214ENST00000600573 KDM1BQ8NB78 822 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 OR4L1Q8NH43 312 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 ZNF398Q8TD17 642 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 PIH1D2Q8WWB5 315 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 RSPRY1Q96DX4 576 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 RIPOR3Q96MK2 946 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 FAM83CQ9BQN1 747 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 TLK1Q9UKI8 766 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 EMCNQ9ULC0 261 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 VPS9D1Q9Y2B5 631 aa20.09■□□□□ 0.81
PNKP-214ENST00000600573 DOCK6Q96HP0 2047 aa20.08■□□□□ 0.81
PNKP-214ENST00000600573 MYO7AQ13402 2215 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 ANKRD65E5RJM6 399 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 H7C0S8 307 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 CTSOP43234 321 aaPredicted RBP20.08■□□□□ 0.8
PNKP-214ENST00000600573 CTBP1Q13363 440 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 CCDC153Q494R4 210 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 ACCSLQ4AC99 568 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 PREPLQ4J6C6 727 aaPredicted RBP20.08■□□□□ 0.8
PNKP-214ENST00000600573 MFSD6LQ8IWD5 586 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 DNAJC1Q96KC8 554 aaKnown RBP20.08■□□□□ 0.8
PNKP-214ENST00000600573 RPL10LQ96L21 214 aaKnown RBP20.08■□□□□ 0.8
PNKP-214ENST00000600573 TBATAQ96M53 351 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 GGT7Q9UJ14 662 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 PPIL1Q9Y3C6 166 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 SPO11Q9Y5K1 396 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 USH1CQ9Y6N9 552 aa20.08■□□□□ 0.8
PNKP-214ENST00000600573 A0A096LPK6 155 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 STX7O15400 261 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 CD3EAPO15446 510 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 TOP3BO95985 862 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 PROCP04070 461 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 NFKBIAP25963 317 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 GABRB3P28472 473 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 MTHFRP42898 656 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 ABCG1P45844 678 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 POLR2LP62875 67 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 TMPRSS15P98073 1019 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 FCHO2Q0JRZ9 810 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 USP10Q14694 798 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 CAMK1DQ8IU85 385 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 DENND6AQ8IWF6 608 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 ETFBKMTQ8IXQ9 262 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 GBP7Q8N8V2 638 aaPredicted RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 MDGA1Q8NFP4 955 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 C10orf82Q8WW14 230 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 TSPAN17Q96FV3 270 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 LRIG1Q96JA1 1093 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 TSNARE1Q96NA8 513 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 MECRQ9BV79 373 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 SUV39H2Q9H5I1 410 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 ZNF576Q9H609 170 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 ABCF3Q9NUQ8 709 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 INTS10Q9NVR2 710 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 PKP3Q9Y446 797 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 CHD9Q3L8U1 2897 aa20.07■□□□□ 0.8
PNKP-214ENST00000600573 TNRC18O15417 2968 aaPredicted RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 RANBP2P49792 3224 aaKnown RBP20.07■□□□□ 0.8
PNKP-214ENST00000600573 A0A0J9YYE9 177 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 MYO1CO00159 1063 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 GOT2P00505 430 aaKnown RBP20.06■□□□□ 0.8
PNKP-214ENST00000600573 TRBC1P01850 177 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 DLDP09622 509 aaKnown RBP20.06■□□□□ 0.8
PNKP-214ENST00000600573 HMGCLP35914 325 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 CSRP3P50461 194 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 ARSDP51689 593 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 PTPN5P54829 565 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 SLC12A2P55011 1212 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 MPP1Q00013 466 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 EIF4HQ15056 248 aaKnown RBP20.06■□□□□ 0.8
PNKP-214ENST00000600573 CHI3L2Q15782 390 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 FASTKD1Q53R41 847 aaKnown RBP20.06■□□□□ 0.8
PNKP-214ENST00000600573 PPM1JQ5JR12 505 aa20.06■□□□□ 0.8
PNKP-214ENST00000600573 PTAR1Q7Z6K3 402 aaPredicted RBP20.06■□□□□ 0.8
PNKP-214ENST00000600573 CLEC14AQ86T13 490 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms