RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 A0A1W2PQU0 124 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 UPK3BL1B0FP48 263 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 UPK3BL2E5RIL1 263 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 H7C0C1 242 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 KCNK3O14649 394 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 KHNYNO15037 678 aaKnown RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 CHUKO15111 745 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 BCAT2O15382 392 aaPredicted RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 HTRA2O43464 458 aaPredicted RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 MAT2AP31153 395 aaKnown RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 NUDT1P36639 197 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 ATP5OP48047 213 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 DSC2Q02487 901 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 ZNF844Q08AG5 666 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 TEX44Q53QW1 395 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 SLC45A4Q5BKX6 768 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 TRIM61Q5EBN2 209 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 LRRC73Q5JTD7 316 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 ZCCHC9Q8N567 271 aaKnown RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 TTC13Q8NBP0 860 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 CEP41Q9BYV8 373 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 CARD9Q9H257 536 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 RIF1Q5UIP0 2472 aaKnown RBP19.73■□□□□ 0.75
LSM4-203ENST00000593829 PRR5-ARHGAP8B1AHC4 643 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 PATE3B3GLJ2 98 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 PTPN3P26045 913 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SEC24CP53992 1094 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 KLF1Q13351 362 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 KIAA1161Q6NSJ0 714 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SLC23A3Q6PIS1 610 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 ZSWIM9Q86XI8 627 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 KLHL7Q8IXQ5 586 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 ARRDC2Q8TBH0 407 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 HTR3CQ8WXA8 447 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SPOCK2Q92563 424 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 AGAP3Q96P47 875 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 ORAI3Q9BRQ5 295 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 EBF2Q9HAK2 575 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 TTC7AQ9ULT0 858 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 ITM2BQ9Y287 266 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 EP300Q09472 2414 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 E7EVH7 732 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SPINT1O43278 529 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 CFIP05156 583 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SERPINF2P08697 491 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 EIF3EP60228 445 aaKnown RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 RPS21P63220 83 aaKnown RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 NIPAL4Q0D2K0 466 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 ELP6Q0PNE2 266 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 TRAF2Q12933 501 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 HLTFQ14527 1009 aaKnown RBP eCLIP19.72■□□□□ 0.75
LSM4-203ENST00000593829 SF3A2Q15428 464 aaKnown RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 TRADDQ15628 312 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 SETMARQ53H47 684 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 LACTB2Q53H82 288 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 ERAP2Q6P179 960 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 PRR23CQ6ZRP0 262 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 C12orf50Q8NA57 414 aaPredicted RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 PDCD6IPQ8WUM4 868 aaKnown RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 FERMT1Q9BQL6 677 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 NUSAP1Q9BXS6 441 aaKnown RBP19.72■□□□□ 0.75
LSM4-203ENST00000593829 PCDH12Q9NPG4 1184 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 GGT7Q9UJ14 662 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 DMTF1Q9Y222 760 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 RAI2Q9Y5P3 530 aa19.72■□□□□ 0.75
LSM4-203ENST00000593829 GON4LQ3T8J9 2241 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 PIEZO1Q92508 2521 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 RBP3P10745 1247 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 PPP2R2AP63151 447 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 ZNF284Q2VY69 593 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 TMEM259Q4ZIN3 620 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 SEL1L3Q68CR1 1132 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 TCEAL6Q6IPX3 200 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 CDKL3Q8IVW4 592 aaPredicted RBP19.71■□□□□ 0.75
LSM4-203ENST00000593829 KIAA2013Q8IYS2 634 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 TCEAL3Q969E4 200 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 TEKT5Q96M29 485 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 VAT1Q99536 393 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 FAM118BQ9BPY3 351 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 TM9SF3Q9HD45 589 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 SLC6A14Q9UN76 642 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 ZFR2Q9UPR6 939 aaKnown RBP19.71■□□□□ 0.75
LSM4-203ENST00000593829 PCDHB9Q9Y5E1 797 aa19.71■□□□□ 0.75
LSM4-203ENST00000593829 ITIH2P19823 946 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CA4P22748 312 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 AFF3P51826 1226 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 ARMC12Q5T9G4 340 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 RALGAPA1Q6GYQ0 2036 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 MAGEC3Q8TD91 643 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 SERAC1Q96JX3 654 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 FAM114A2Q9NRY5 505 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 SLCO1B1Q9Y6L6 691 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 FAM186AA6NE01 2351 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 TCRBV7S2A1N4TA0A589 114 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CEP104O60308 925 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 PGLSO95336 258 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 RBL1P28749 1068 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CD86P42081 329 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms