RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 LSMEM2Q8N112 164 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 ZNF564Q8TBZ8 553 aaPredicted RBP23.35■■□□□ 1.33
MBD3-211ENST00000592965 FUBP1Q96AE4 644 aaKnown RBP23.35■■□□□ 1.33
MBD3-211ENST00000592965 PDXPQ96GD0 296 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 ZNF578Q96N58 590 aaPredicted RBP23.35■■□□□ 1.33
MBD3-211ENST00000592965 POLR1BQ9H9Y6 1135 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 NOD2Q9HC29 1040 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 PADI4Q9UM07 663 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 PCDHGC4Q9Y5F7 938 aa23.35■■□□□ 1.33
MBD3-211ENST00000592965 ARHGEF17Q96PE2 2063 aaPredicted RBP23.35■■□□□ 1.33
MBD3-211ENST00000592965 CPP00450 1065 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 MPOP05164 745 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 TPM3P06753 285 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 KELP23276 732 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 NFKBIAP25963 317 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 ITPKBP27987 946 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 CASP14P31944 242 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 TRIM23P36406 574 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 ARSEP51690 589 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 HADHQ16836 314 aaKnown RBP23.34■■□□□ 1.33
MBD3-211ENST00000592965 MARC1Q5VT66 337 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 NYAP1Q6ZVC0 841 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 RD3Q7Z3Z2 195 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 KYQ8NBH2 561 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 OR1E3Q8WZA6 343 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 CRELD1Q96HD1 420 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 COQ10AQ96MF6 247 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 FGF22Q9HCT0 170 aa23.34■■□□□ 1.33
MBD3-211ENST00000592965 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.34■■□□□ 1.334e-6■■□□□ 12.6
MBD3-211ENST00000592965 MGAQ8IWI9 3026 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 TNFRSF10CO14798 259 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 TNFP01375 233 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 CD48P09326 243 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 VIPR1P32241 457 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 TRAF2Q12933 501 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 MMRN1Q13201 1228 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 ACOX1Q15067 660 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 CNGA3Q16281 694 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 KCTD16Q68DU8 428 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 IGF2-ASQ6U949 168 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 CRTC1Q6UUV9 634 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 TEX26Q8N6G2 289 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 OR56A4Q8NGH8 313 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 CCDC3Q9BQI4 270 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 XPO4Q9C0E2 1151 aaKnown RBP23.33■■□□□ 1.33
MBD3-211ENST00000592965 WDR26Q9H7D7 661 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 KCTD5Q9NXV2 234 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 UVRAGQ9P2Y5 699 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 PHTF1Q9UMS5 762 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 UNC13CQ8NB66 2214 aa23.33■■□□□ 1.33
MBD3-211ENST00000592965 TMEM202A6NGA9 273 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 A8MX80 341 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 HEXIM1O94992 359 aaKnown RBP23.32■■□□□ 1.32
MBD3-211ENST00000592965 SSR1P43307 286 aaKnown RBP23.32■■□□□ 1.32
MBD3-211ENST00000592965 ERVPABLB-1P60509 514 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 MAXP61244 160 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 GALNT2Q10471 571 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 DPYSL3Q14195 570 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 SOWAHCQ53LP3 525 aaPredicted RBP23.32■■□□□ 1.32
MBD3-211ENST00000592965 PNCKQ6P2M8 343 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 PDCD6IPQ8WUM4 868 aaKnown RBP23.32■■□□□ 1.32
MBD3-211ENST00000592965 NUS1Q96E22 293 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 HIC2Q96JB3 615 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 MCCC1Q96RQ3 725 aaPredicted RBP23.32■■□□□ 1.32
MBD3-211ENST00000592965 SIRPGQ9P1W8 387 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 GULP1Q9UBP9 304 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 GPR34Q9UPC5 381 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 ENTPD2Q9Y5L3 495 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 KALRNO60229 2985 aa23.32■■□□□ 1.32
MBD3-211ENST00000592965 MFSD11O43934 449 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 PROSCO94903 275 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 PGLSO95336 258 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 PCBP4P57723 403 aaKnown RBP23.31■■□□□ 1.32
MBD3-211ENST00000592965 PAFAH1B3Q15102 231 aaKnown RBP23.31■■□□□ 1.32
MBD3-211ENST00000592965 TCEA2Q15560 299 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 CBARPQ8N350 705 aaPredicted RBP23.31■■□□□ 1.32
MBD3-211ENST00000592965 ATXN7L3BQ96GX2 97 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 ZNF670Q9BS34 389 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 ASCL3Q9NQ33 180 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 CTTNBP2NLQ9P2B4 639 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 LCMT1Q9UIC8 334 aa23.31■■□□□ 1.32
MBD3-211ENST00000592965 PSMD11O00231 422 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 PDE2AO00408 941 aaPredicted RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 NTN3O00634 580 aaPredicted RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 CYP2A6P11509 494 aaPredicted RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 MYCLP1P12525 358 aaPredicted RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 LHCGRP22888 699 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 GARSP41250 739 aaKnown RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 PDX1P52945 283 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 SPIDRQ14159 915 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 SLC18A3Q16572 532 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 ARMC12Q5T9G4 340 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 NCBP2-AS2Q69YL0 99 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 CPNE8Q86YQ8 564 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 PELI3Q8N2H9 469 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 ZNF248Q8NDW4 579 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 OR6C4Q8NGE1 309 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 CTNNBL1Q8WYA6 563 aaPredicted RBP23.3■■□□□ 1.32
MBD3-211ENST00000592965 MAML1Q92585 1016 aa23.3■■□□□ 1.32
MBD3-211ENST00000592965 FATE1Q969F0 183 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms