RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 MAPK11Q15759 364 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
DNMT1-207ENST00000586588 CYP51A1Q16850 503 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 TUBA3EQ6PEY2 450 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 ADCK1Q86TW2 530 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 C8orf59Q8N0T1 100 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-207ENST00000586588 LSM14AQ8ND56 463 aaKnown RBP13.16□□□□□ -0.3
DNMT1-207ENST00000586588 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 NPAP1Q9NZP6 1156 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-207ENST00000586588 RUVBL2Q9Y230 463 aaKnown RBP13.16□□□□□ -0.3
DNMT1-207ENST00000586588 NDUFAF1Q9Y375 327 aa13.16□□□□□ -0.3
DNMT1-207ENST00000586588 ZCWPW2A0A1B0GU75 182 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 K7ERI5 159 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 XYLBO75191 536 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 GABBR2O75899 941 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 MICAL2O94851 1124 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 IST1P53990 364 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 GP2P55259 537 aaKnown RBP13.15□□□□□ -0.3
DNMT1-207ENST00000586588 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
DNMT1-207ENST00000586588 DPY19L1Q2PZI1 675 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 ZNF669Q96BR6 464 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-207ENST00000586588 TARS2Q9BW92 718 aaKnown RBP13.15□□□□□ -0.3
DNMT1-207ENST00000586588 DGCR6LQ9BY27 220 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 EGFL7Q9UHF1 273 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PDE10AQ9Y233 779 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SNX5Q9Y5X3 404 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PMF1-BGLAPU3KQ54 211 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 MAN1A2O60476 641 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 C19orf57Q0VDD7 668 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SLC13A2Q13183 592 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 C6orf141Q5SZD1 244 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SIMC1Q8NDZ2 872 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 DYNC2LI1Q8TCX1 351 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 HTRA1Q92743 480 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 RDH12Q96NR8 316 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 DACH2Q96NX9 599 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 ANAPC2Q9UJX6 822 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.3
DNMT1-207ENST00000586588 ZNF99A8MXY4 864 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 PCMT1P22061 227 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 DPYSL2Q16555 572 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 RSBN1Q5VWQ0 802 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 DTLQ9NZJ0 730 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TAF4O00268 1085 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 KRT19P08727 400 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 UBL4AP11441 157 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 GRIK1P39086 918 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 ARSFP54793 590 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 P2RX3P56373 397 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TUBA1BP68363 451 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 FOXM1Q08050 763 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 KRR1Q13601 381 aaKnown RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 SURF1Q15526 300 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 ADPRMQ3LIE5 342 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TSTD2Q5T7W7 516 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TTC23Q5W5X9 447 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 FAAH2Q6GMR7 532 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 PTRH1Q86Y79 214 aaKnown RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 FUNDC1Q8IVP5 155 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 SVOPQ8N4V2 548 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 BTBD2Q9BX70 525 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 DSN1Q9H410 356 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 NGRNQ9NPE2 291 aaKnown RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 CCDC177Q9NQR7 707 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-207ENST00000586588 NSMCE4AQ9NXX6 385 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
DNMT1-207ENST00000586588 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms