RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GPR22Q99680 433 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 MCMBPQ9BTE3 642 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 PITPNM3Q9BZ71 974 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 SPHK2Q9NRA0 654 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.44□□□□□ -0.74
LIG3-203ENST00000585370 MARK1Q9P0L2 795 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 MID2Q9UJV3 735 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CORO1CQ9ULV4 474 aaPredicted RBP10.44□□□□□ -0.74
LIG3-203ENST00000585370 RAI2Q9Y5P3 530 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 CEP250Q9BV73 2442 aa10.44□□□□□ -0.74
LIG3-203ENST00000585370 F5P12259 2224 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 OBSL1O75147 1896 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 A0A1W2PQ67 120 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 ANKRD66B4E2M5 251 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 PFDN6O15212 129 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 LDB2O43679 373 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 SNAP91O60641 907 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 IL1BP01584 269 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 ALDOAP04075 364 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 APOA4P06727 396 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 GLDCP23378 1020 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 CRABP2P29373 138 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 LEPRP48357 1165 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 CD151P48509 253 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 SNRPD1P62314 119 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 PRAMEP78395 509 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 POU4F1Q01851 419 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 RAD51Q06609 339 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 BMPR2Q13873 1038 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 IHHQ14623 411 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 ITIH4Q14624 930 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 SLC5A9Q2M3M2 681 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 SLC44A4Q53GD3 710 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 ATG16L1Q676U5 607 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 MRNIPQ6NTE8 343 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 TPGS1Q6ZTW0 290 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 MTSS1LQ765P7 747 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 SDCCAG8Q86SQ7 713 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 ZC3HC1Q86WB0 502 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 ARID3BQ8IVW6 561 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 C1orf210Q8IVY1 113 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 PLPP6Q8IY26 295 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 MAML2Q8IZL2 1156 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 DCLK2Q8N568 766 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 CCDC197Q8NCU1 140 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 PJA1Q8NG27 643 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 SREK1Q8WXA9 508 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 ZNF75CPQ92670 426 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 RMDN1Q96DB5 314 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 TSPAN17Q96FV3 270 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 VPS39Q96JC1 886 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 LMLNQ96KR4 655 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 ZNF778Q96MU6 729 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 TSNARE1Q96NA8 513 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 TCF12Q99081 682 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 AGAP2Q99490 1192 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 KLF6Q99612 283 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 TDRD1Q9BXT4 1180 aaKnown RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 SLC13A1Q9BZW2 595 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 CEP44Q9C0F1 390 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 MANSC1Q9H8J5 431 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 OBP2AQ9NY56 170 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 TLK1Q9UKI8 766 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 FBXO5Q9UKT4 447 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 STARD13Q9Y3M8 1113 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
LIG3-203ENST00000585370 PSAT1Q9Y617 370 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 R4GN57 208 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 COL4A3Q01955 1670 aa10.43□□□□□ -0.74
LIG3-203ENST00000585370 KANSL1LA0AUZ9 987 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 ERICH4A6NGS2 130 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 TPP1O14773 563 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SOCS5O75159 536 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 RPP40O75818 363 aaKnown RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 IGSF6O95976 241 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 GSRP00390 522 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 PRLP01236 227 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 LMNAP02545 664 aaKnown RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 AHSGP02765 367 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SP9P0CG40 484 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 NEFHP12036 1026 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 LPOP22079 712 aaPredicted RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 FOXN2P32314 431 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 SERPINB4P48594 390 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 KPNA2P52292 529 aaKnown RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 PDE1CQ14123 709 aaPredicted RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 TAF1BQ53T94 588 aaPredicted RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 PITRM1Q5JRX3 1037 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 ARMC12Q5T9G4 340 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 KIAA0907Q7Z7F0 614 aaPredicted RBP10.42□□□□□ -0.74
LIG3-203ENST00000585370 ADGRG2Q8IZP9 1017 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 APCDD1Q8J025 514 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.42□□□□□ -0.74
LIG3-203ENST00000585370 OR6P1Q8NGX9 317 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 BLOC1S5Q8TDH9 187 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
LIG3-203ENST00000585370 E2F7Q96AV8 911 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms