RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 DMGDHQ9UI17 866 aaKnown RBP14.33□□□□□ -0.12
SKA2-205ENST00000580541 PKP3Q9Y446 797 aa14.33□□□□□ -0.12
SKA2-205ENST00000580541 C1orf232A0A0U1RR37 186 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 FAM86C2PA6NEL3 165 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 GOLGA8MH3BSY2 632 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 EIF3HO15372 352 aaKnown RBP eCLIP14.32□□□□□ -0.12
SKA2-205ENST00000580541 SEMA4FO95754 770 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 CTPS1P17812 591 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 LPOP22079 712 aaPredicted RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 CHRNA4P43681 627 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 ADPRHP54922 357 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 TAF1AQ15573 450 aaPredicted RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 HIF1AQ16665 826 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 PCID2Q5JVF3 399 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 DENND5AQ6IQ26 1287 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 CENPUQ71F23 418 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 GLT6D1Q7Z4J2 308 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 FAM124AQ86V42 546 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 ZSWIM9Q86XI8 627 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 ZCCHC9Q8N567 271 aaKnown RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 PPHLN1Q8NEY8 458 aaKnown RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 CADM4Q8NFZ8 388 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 TOE1Q96GM8 510 aaKnown RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 SERPINB12Q96P63 405 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 RANBP9Q96S59 729 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 TPSD1Q9BZJ3 242 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 PHACTR1Q9C0D0 580 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 GDF3Q9NR23 364 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 WSB2Q9NYS7 404 aaPredicted RBP14.32□□□□□ -0.12
SKA2-205ENST00000580541 B4GALT6Q9UBX8 382 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 CYP8B1Q9UNU6 501 aa14.32□□□□□ -0.12
SKA2-205ENST00000580541 TCRBV7S3A2A0A539 114 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
SKA2-205ENST00000580541 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
SKA2-205ENST00000580541 TM7SF2O76062 418 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 ALPIP09923 528 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 TPH1P17752 444 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 HMGCLP35914 325 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 MMP12P39900 470 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 HADHAP40939 763 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 PXNP49023 591 aaPredicted RBP14.31□□□□□ -0.12
SKA2-205ENST00000580541 METAP1P53582 386 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 PTPN5P54829 565 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
SKA2-205ENST00000580541 SPDYCQ5MJ68 293 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 ANKRD22Q5VYY1 191 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 CASC4Q6P4E1 433 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 CRTC1Q6UUV9 634 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 NRSN1Q8IZ57 195 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 ASB12Q8WXK4 309 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 FOXJ1Q92949 421 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 PEX13Q92968 403 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 IRF2BPLQ9H1B7 796 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 ZSCAN32Q9NX65 697 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 PKD2L2Q9NZM6 624 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 ZNF711Q9Y462 761 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
SKA2-205ENST00000580541 IGHV1OR15-9A0A0B4J2B8 117 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 NPIPB15A6NHN6 443 aaPredicted RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 FAM47DPA6NHR8 397 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 PLK4O00444 970 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 STX7O15400 261 aaKnown RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 RNGTTO60942 597 aaKnown RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 TMEM63AO94886 807 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 ACSL1P33121 698 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 GRIA1P42261 906 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 FNTBP49356 437 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 LIG3P49916 1009 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 CCR5P51681 352 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 CBLBQ13191 982 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 SEPT6Q14141 434 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 POU6F1Q14863 301 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 ACOX1Q15067 660 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 ANGPT1Q15389 498 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 LRRC66Q68CR7 880 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 TSSK4Q6SA08 328 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 LIPIQ6XZB0 460 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 TMC3Q7Z5M5 1100 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 CAND1Q86VP6 1230 aaKnown RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 TRIM69Q86WT6 500 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 HORMAD1Q86X24 394 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 GABPB2Q8TAK5 448 aaPredicted RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 STYXQ8WUJ0 223 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 HINFPQ9BQA5 517 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 MRM3Q9HC36 420 aaKnown RBP14.3□□□□□ -0.12
SKA2-205ENST00000580541 GRHL1Q9NZI5 618 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 SERGEFQ9UGK8 458 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 RIMKLBQ9ULI2 386 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 PCDHGA2Q9Y5H1 932 aa14.3□□□□□ -0.12
SKA2-205ENST00000580541 ESYT3A0FGR9 886 aa14.29□□□□□ -0.12
SKA2-205ENST00000580541 A8MX80 341 aa14.29□□□□□ -0.12
SKA2-205ENST00000580541 BHMG1C9JSJ3 638 aaPredicted RBP14.29□□□□□ -0.12
SKA2-205ENST00000580541 WNT9AO14904 365 aa14.29□□□□□ -0.12
SKA2-205ENST00000580541 RPP40O75818 363 aaKnown RBP14.29□□□□□ -0.12
SKA2-205ENST00000580541 CLDN7O95471 211 aa14.29□□□□□ -0.12
SKA2-205ENST00000580541 TTC4O95801 387 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms