RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 PLA2G15Q8NCC3 412 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 ZDHHC1Q8WTX9 485 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 MOCOSQ96EN8 888 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 TCTN2Q96GX1 697 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 GDAP1L1Q96MZ0 367 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 ZYG11BQ9C0D3 744 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 FBXO8Q9NRD0 319 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 TMEM9Q9P0T7 183 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 CSMD2Q7Z408 3487 aa13.91□□□□□ -0.18
CSNK1D-211ENST00000579316 TSPAN11A1L157 253 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 P4HA2O15460 535 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 ECEL1O95672 775 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 TFE3P19532 575 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 F8A1P23610 371 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 MPSTP25325 297 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 EIF2S3LQ2VIR3 472 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 ATXN7L2Q5T6C5 722 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 NKAIN2Q5VXU1 208 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 KDELC2Q7Z4H8 507 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 NRROSQ86YC3 692 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 APLFQ8IW19 511 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 ESX1Q8N693 406 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 HCAR2Q8TDS4 363 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 HMCESQ96FZ2 354 aa13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 PPARGC1AQ9UBK2 798 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 ERRFI1Q9UJM3 462 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 MRPS18BQ9Y676 258 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-211ENST00000579316 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 TCP11X1B4DZS4 312 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 F9P00740 461 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 FURINP09958 794 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 TRIM23P36406 574 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 MMP12P39900 470 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 GPLD1P80108 840 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 SLC6A3Q01959 620 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 RAD51Q06609 339 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 ARHGAP22Q7Z5H3 698 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 PCDH12Q9NPG4 1184 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 TAAR2Q9P1P5 351 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 RPS6KL1Q9Y6S9 549 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 POLEQ07864 2286 aa13.89□□□□□ -0.19
CSNK1D-211ENST00000579316 PRSS38A1L453 326 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 PPM1DO15297 605 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 THAP12O43422 761 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 SRGAP2O75044 1071 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 RECKO95980 971 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 KRT5P13647 590 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 XPAP23025 273 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 GNA15P30679 374 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 LIG3P49916 1009 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 CETN1Q12798 172 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 MRPL49Q13405 166 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 STIM1Q13586 685 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 UGP2Q16851 508 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 CTRCQ99895 268 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 ACP6Q9NPH0 428 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 STAP1Q9ULZ2 295 aa13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 OAS3Q9Y6K5 1087 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-211ENST00000579316 ZSCAN5CA6NGD5 496 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 TMCC1O94876 653 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 IGSF6O95976 241 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 MBD3O95983 291 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 ERBB2P04626 1255 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 PPP1R2P41236 205 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 MAPKAPK2P49137 400 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 INPP5JQ15735 1006 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 NADK2Q4G0N4 442 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 ANKRD40Q6AI12 368 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 ERAP2Q6P179 960 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 NAGSQ8N159 534 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 PATE1Q8WXA2 126 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 CASKIN2Q8WXE0 1202 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 TSG101Q99816 390 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 LGR4Q9BXB1 951 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 MAGEH1Q9H213 219 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 NDFIP2Q9NV92 336 aa13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.87□□□□□ -0.192e-12■■■■■ 34.1
CSNK1D-211ENST00000579316 TNRC6AQ8NDV7 1962 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-211ENST00000579316 PDE2AO00408 941 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-211ENST00000579316 PRF1P14222 555 aa13.86□□□□□ -0.19
CSNK1D-211ENST00000579316 DLSTP36957 453 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms