RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PHTF1Q9UMS5 762 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 DGKBQ9Y6T7 804 aa15.93■□□□□ 0.14
CRLF3-203ENST00000578692 ASXL3Q9C0F0 2248 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 TMEM202A6NGA9 273 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 TCEA3O75764 348 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 CPP00450 1065 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 TPM3P06753 285 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 HOXC4P09017 264 aaPredicted RBP15.92■□□□□ 0.14
CRLF3-203ENST00000578692 CD48P09326 243 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 KELP23276 732 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 NFKBIAP25963 317 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 HNRNPH3P31942 346 aaKnown RBP15.92■□□□□ 0.14
CRLF3-203ENST00000578692 KIAA1024LP59773 190 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 ZSCAN23Q3MJ62 389 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 ATP13A4Q4VNC1 1196 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 PNCKQ6P2M8 343 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 RBM44Q6ZP01 1051 aaKnown RBP15.92■□□□□ 0.14
CRLF3-203ENST00000578692 ARL10Q8N8L6 244 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 PCDH19Q8TAB3 1148 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 WDR48Q8TAF3 677 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 OR1E3Q8WZA6 343 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 COQ10AQ96MF6 247 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 RBM15Q96T37 977 aaKnown RBP eCLIP15.92■□□□□ 0.14
CRLF3-203ENST00000578692 CCDC3Q9BQI4 270 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 KCTD5Q9NXV2 234 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 SIRPGQ9P1W8 387 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 CTTNBP2NLQ9P2B4 639 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 NENFQ9UMX5 172 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 GPR34Q9UPC5 381 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 ENTPD2Q9Y5L3 495 aa15.92■□□□□ 0.14
CRLF3-203ENST00000578692 LRP4O75096 1905 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 TNFRSF10CO14798 259 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 DXOO77932 396 aaKnown RBP15.91■□□□□ 0.14
CRLF3-203ENST00000578692 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 CYP2A6P11509 494 aaPredicted RBP15.91■□□□□ 0.14
CRLF3-203ENST00000578692 VIPR1P32241 457 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 ARSEP51690 589 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 TRAF2Q12933 501 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 SOWAHCQ53LP3 525 aaPredicted RBP15.91■□□□□ 0.14
CRLF3-203ENST00000578692 DENND2CQ68D51 928 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 KCTD16Q68DU8 428 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 CBARPQ8N350 705 aaPredicted RBP15.91■□□□□ 0.14
CRLF3-203ENST00000578692 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 PDXPQ96GD0 296 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 LGR4Q9BXB1 951 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 NT5MQ9NPB1 228 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 MRPL40Q9NQ50 206 aaKnown RBP15.91■□□□□ 0.14
CRLF3-203ENST00000578692 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
CRLF3-203ENST00000578692 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 CASC3O15234 703 aaKnown RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 PROSCO94903 275 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 HEXIM1O94992 359 aaKnown RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 GJC1P36383 396 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ERVPABLB-1P60509 514 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ITKQ08881 620 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 SPIDRQ14159 915 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 DPYSL3Q14195 570 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 PAFAH1B3Q15102 231 aaKnown RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 CNGA3Q16281 694 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 SLC18A3Q16572 532 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ANKRD20A8PQ5CZ79 823 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 C3orf38Q5JPI3 329 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ARMC12Q5T9G4 340 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 TAF8Q7Z7C8 310 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 TEX26Q8N6G2 289 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 KYQ8NBH2 561 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ZNF248Q8NDW4 579 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 CTNNBL1Q8WYA6 563 aaPredicted RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 NUS1Q96E22 293 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 SCRN2Q96FV2 425 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 ATXN7L3BQ96GX2 97 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 WDR26Q9H7D7 661 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 FGF22Q9HCT0 170 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 UVRAGQ9P2Y5 699 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 MOSPD1Q9UJG1 213 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 SATB2Q9UPW6 733 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 RAI2Q9Y5P3 530 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 RP1P56715 2156 aa15.9■□□□□ 0.14
CRLF3-203ENST00000578692 COL27A1Q8IZC6 1860 aaPredicted RBP15.9■□□□□ 0.14
CRLF3-203ENST00000578692 NTN3O00634 580 aaPredicted RBP15.89■□□□□ 0.13
CRLF3-203ENST00000578692 MFSD11O43934 449 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 PGLSO95336 258 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 GARSP41250 739 aaKnown RBP15.89■□□□□ 0.13
CRLF3-203ENST00000578692 PCBP4P57723 403 aaKnown RBP15.89■□□□□ 0.13
CRLF3-203ENST00000578692 ARHGEF7Q14155 803 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 PDK2Q15119 407 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 SKOR2Q2VWA4 1001 aaPredicted RBP15.89■□□□□ 0.13
CRLF3-203ENST00000578692 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 CPNE8Q86YQ8 564 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 MAP7D3Q8IWC1 876 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 FAM46DQ8NEK8 389 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 GPR156Q8NFN8 814 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 OR6C4Q8NGE1 309 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 OR8K1Q8NGG5 319 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 CCDC74AQ96AQ1 378 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 LGMNQ99538 433 aa15.89■□□□□ 0.13
CRLF3-203ENST00000578692 SEMA3CQ99985 751 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms