RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TMEM207Q6UWW9 146 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 OR6P1Q8NGX9 317 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 AKTIPQ9H8T0 292 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 CCM2LQ9NUG4 571 aaPredicted RBP15.68■□□□□ 0.1
NUP88-207ENST00000573584 MPP6Q9NZW5 540 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 SFMBT1Q9UHJ3 866 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 HEMK1Q9Y5R4 338 aaPredicted RBP15.68■□□□□ 0.1
NUP88-207ENST00000573584 A0A0J9YYE9 177 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 NR5A2O00482 541 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 IRAK2O43187 625 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 SERPINH1P50454 418 aaKnown RBP15.68■□□□□ 0.1
NUP88-207ENST00000573584 ATP4BP51164 291 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 TBCELQ5QJ74 424 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 ISCA2Q86U28 154 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 CILP2Q8IUL8 1156 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 CBR4Q8N4T8 237 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 DIS3LQ8TF46 1054 aaKnown RBP15.68■□□□□ 0.1
NUP88-207ENST00000573584 MSI1O43347 362 aaKnown RBP15.67■□□□□ 0.1
NUP88-207ENST00000573584 HOXC13P31276 330 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CCR1P32246 355 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 GALK1P51570 392 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CDKN2DP55273 166 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 EIF4EBP2Q13542 120 aaPredicted RBP15.67■□□□□ 0.1
NUP88-207ENST00000573584 IRAK1BP1Q5VVH5 260 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 SPPL2CQ8IUH8 684 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CLYBLQ8N0X4 340 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 OR13J1Q8NGT2 312 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 MIOSQ9NXC5 875 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 MAP10Q9P2G4 905 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 DNAH12Q6ZR08 3092 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CASTOR2A6NHX0 329 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CCL22O00626 93 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 NME4O00746 187 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 BMP10O95393 424 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 GNAO1P09471 354 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 ITKQ08881 620 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 LPIN1Q14693 890 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 UGT3A2Q3SY77 523 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 VPS26BQ4G0F5 336 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 UNC50Q53HI1 259 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 BRMS1LQ5PSV4 323 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 KDELC1Q6UW63 502 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 CAMK1DQ8IU85 385 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 LZICQ8WZA0 190 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 EXT2Q93063 718 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 ZUFSPQ96AP4 578 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 L3HYPDHQ96EM0 354 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 HOPXQ9BPY8 73 aaPredicted RBP15.67■□□□□ 0.1
NUP88-207ENST00000573584 PAAF1Q9BRP4 392 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 GPATCH1Q9BRR8 931 aaKnown RBP15.67■□□□□ 0.1
NUP88-207ENST00000573584 SLC25A51Q9H1U9 297 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 LMCD1Q9NZU5 365 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 FAM149AA5PLN7 773 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 BBIP1A8MTZ0 92 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
NUP88-207ENST00000573584 PSEN2P49810 448 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 SH3BP2P78314 561 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 GEN1Q17RS7 908 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 TIGD5Q53EQ6 642 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 MANEALQ5VSG8 457 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 PIM3Q86V86 326 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 OR52K2Q8NGK3 314 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 LPPQ93052 612 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 RTP3Q9BQQ7 232 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 ARNT2Q9HBZ2 717 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 RHBDL2Q9NX52 303 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 EGFL7Q9UHF1 273 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 DNAJC15Q9Y5T4 150 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 GMEB1Q9Y692 573 aa15.67■□□□□ 0.1
NUP88-207ENST00000573584 DHRS12A0PJE2 317 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 ESRRGP62508 458 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 HERVK_113P63132 956 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 GRB14Q14449 540 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 IL31Q6EBC2 164 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TTC33Q6PID6 262 aaPredicted RBP15.66■□□□□ 0.1
NUP88-207ENST00000573584 ZNF786Q8N393 782 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 RYBPQ8N488 228 aaPredicted RBP15.66■□□□□ 0.1
NUP88-207ENST00000573584 NPLOC4Q8TAT6 608 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 GFM2Q969S9 779 aaKnown RBP15.66■□□□□ 0.1
NUP88-207ENST00000573584 SLC10A4Q96EP9 437 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TRIM62Q9BVG3 475 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 ERVK-6Q9BXR3 956 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 SMOXQ9NWM0 555 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 GIMAP2Q9UG22 337 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 FNDC1Q4ZHG4 1894 aaPredicted RBP15.66■□□□□ 0.1
NUP88-207ENST00000573584 A0A087WXM4 84 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TPST1O60507 370 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 UGT1A6P19224 532 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 IL10P22301 178 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 HTR7P34969 479 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 MAXP61244 160 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 INPP5AQ14642 412 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 GPR141Q7Z602 305 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 PACRGLQ8N7B6 248 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 RTL3Q8N8U3 475 aaKnown RBP15.66■□□□□ 0.1
NUP88-207ENST00000573584 SH3RF2Q8TEC5 729 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TRPC4APQ8TEL6 797 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 HDAC10Q969S8 669 aa15.66■□□□□ 0.1
NUP88-207ENST00000573584 TRIM15Q9C019 465 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms