RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PCDH9Q9HC56 1237 aa20.73■□□□□ 0.91
CHMP6-204ENST00000572778 DOCK9Q9BZ29 2069 aa20.73■□□□□ 0.91
CHMP6-204ENST00000572778 SHROOM3Q8TF72 1996 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 NPIPB15A6NHN6 443 aaPredicted RBP20.72■□□□□ 0.91
CHMP6-204ENST00000572778 APOC4-APOC2K7ER74 178 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 APOC2P02655 101 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 MMP2P08253 660 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 PTPN3P26045 913 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 AADACL2Q6P093 401 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 TSPAN33Q86UF1 283 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 RNF10Q8N5U6 811 aaKnown RBP20.72■□□□□ 0.91
CHMP6-204ENST00000572778 LPCAT1Q8NF37 534 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 SMIM14Q96QK8 99 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 MCCC1Q96RQ3 725 aaPredicted RBP20.72■□□□□ 0.91
CHMP6-204ENST00000572778 RBM15Q96T37 977 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHMP6-204ENST00000572778 HERPUD2Q9BSE4 406 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 APOOQ9BUR5 198 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 FTSJ1Q9UET6 329 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 EFR3BQ9Y2G0 817 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 PPIL1Q9Y3C6 166 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 CAPN6Q9Y6Q1 641 aa20.72■□□□□ 0.91
CHMP6-204ENST00000572778 TMEM131Q92545 1883 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 KNL1Q8NG31 2342 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 A0A0J9YYE9 177 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 MIF4GDA9UHW6 222 aaKnown RBP20.71■□□□□ 0.91
CHMP6-204ENST00000572778 H3BM21 787 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 H7C0C1 242 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 TOR1BO14657 336 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 PIAS2O75928 621 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 PRLP01236 227 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 TRBC1P01850 177 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 CSF2P04141 144 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 FTH1P19P0C7X4 201 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 GM2AP17900 193 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 LHCGRP22888 699 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 DGKAP23743 735 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 PMLP29590 882 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 ATP5OP48047 213 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 HNRNPKP61978 463 aaKnown RBP eCLIP20.71■□□□□ 0.91
CHMP6-204ENST00000572778 EIF2B5Q13144 721 aaKnown RBP20.71■□□□□ 0.91
CHMP6-204ENST00000572778 MTM1Q13496 603 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 KANSL1Q7Z3B3 1105 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 KDELC2Q7Z4H8 507 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 GLRX5Q86SX6 157 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 SLC25A45Q8N413 288 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 PLA2G15Q8NCC3 412 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 IMP4Q96G21 291 aaKnown RBP20.71■□□□□ 0.91
CHMP6-204ENST00000572778 TEKT5Q96M29 485 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 COQ10AQ96MF6 247 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 SLC25A51Q9H1U9 297 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 GLOD4Q9HC38 313 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 UCKL1Q9NWZ5 548 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 OR1A2Q9Y585 309 aa20.71■□□□□ 0.91
CHMP6-204ENST00000572778 A0A0U1RQS6 177 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 HACD1B0YJ81 288 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 MTSS1O43312 755 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 TNFSF14O43557 240 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 NRDCO43847 1150 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 LDOC1O95751 146 aaPredicted RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 PTMAP06454 111 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 NME1P15531 152 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 JUNDP17535 347 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 PTPN7P35236 360 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 ETV3P41162 512 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 RPL26P61254 145 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 OTUD4Q01804 1114 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 WASHC5Q12768 1159 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 ZNF211Q13398 564 aaPredicted RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 CRTC1Q6UUV9 634 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 MACC1Q6ZN28 852 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 HSD11B1LQ7Z5J1 315 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 PNPLA1Q8N8W4 532 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 NUS1Q96E22 293 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 CNDP2Q96KP4 475 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 QKIQ96PU8 341 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 KLHL8Q9P2G9 620 aaPredicted RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 KLF15Q9UIH9 416 aa20.7■□□□□ 0.9
CHMP6-204ENST00000572778 RPL26L1Q9UNX3 145 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 APOBEC2Q9Y235 224 aaKnown RBP20.7■□□□□ 0.9
CHMP6-204ENST00000572778 PSMD11O00231 422 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 DDX3YO15523 660 aaKnown RBP20.69■□□□□ 0.9
CHMP6-204ENST00000572778 TJP3O95049 919 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 CCDC175P0C221 793 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 ATXN1LP0C7T5 689 aaKnown RBP20.69■□□□□ 0.9
CHMP6-204ENST00000572778 HTR1BP28222 390 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 XRCC4Q13426 336 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 NOMO1Q15155 1222 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 PCSK7Q16549 785 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 CCDC157Q569K6 752 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 FAXCQ5TGI0 409 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 LRRC66Q68CR7 880 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 ENPP7Q6UWV6 458 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 Q6ZVL8 140 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 SLCO6A1Q86UG4 719 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 SPATA22Q8NHS9 363 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 ACTL9Q8TC94 416 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 HTR3CQ8WXA8 447 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 MLPHQ9BV36 600 aaPredicted RBP20.69■□□□□ 0.9
CHMP6-204ENST00000572778 ADGRE3Q9BY15 652 aa20.69■□□□□ 0.9
CHMP6-204ENST00000572778 C10orf88Q9H8K7 445 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms