RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RBM44Q6ZP01 1051 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 RFLNAQ6ZTI6 216 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 HSD11B1LQ7Z5J1 315 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 CBARPQ8N350 705 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 SDR16C5Q8N3Y7 309 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 FSTL5Q8N475 847 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 HSPH1Q92598 858 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 SLC46A1Q96NT5 459 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 UBL7Q96S82 380 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 LGMNQ99538 433 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 MGME1Q9BQP7 344 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 TMEM168Q9H0V1 697 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 NCKIPSDQ9NZQ3 722 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 KLQ9UEF7 1012 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 DGKBQ9Y6T7 804 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 SCINQ9Y6U3 715 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 BOD1L1Q8NFC6 3051 aa13.89□□□□□ -0.19
GTF3C1-211ENST00000569653 COL6A6A6NMZ7 2263 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 NPIPB15A6NHN6 443 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TMEM110-MUSTN1A8MSY1 372 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 H3BRJ5 948 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 ATXN7O15265 892 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 NOBOXO60393 691 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TPM3P06753 285 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 ELFN1P0C7U0 828 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TRIM23P36406 574 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 CXADRP78310 365 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 ELOCQ15369 112 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 ESRP1Q6NXG1 681 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TSPAN33Q86UF1 283 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 NIPA2Q8N8Q9 360 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 ZNF248Q8NDW4 579 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 GPR156Q8NFN8 814 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 NAT6Q93015 286 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 FOXP3Q9BZS1 431 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 EVA1BQ9NVM1 165 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 DONSONQ9NYP3 566 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 GPR34Q9UPC5 381 aa13.88□□□□□ -0.19
GTF3C1-211ENST00000569653 SETXQ7Z333 2677 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 A0A1W2PQJ5 194 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 MFSD11O43934 449 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 TCEA3O75764 348 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 HEXIM1O94992 359 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 GYPCP04921 128 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 CYP1A2P05177 515 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 MYBL1P10243 752 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 CTSEP14091 401 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 DESP17661 470 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 ERVPABLB-1P60509 514 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 ATP13A4Q4VNC1 1196 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 FAM182AQ5T1J6 154 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 PNCKQ6P2M8 343 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 LVRNQ6Q4G3 990 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 TMCO3Q6UWJ1 677 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 NRROSQ86YC3 692 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 OR56A4Q8NGH8 313 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 FAM71BQ8TC56 605 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 NUDCD1Q96RS6 583 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 NUP85Q9BW27 656 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 SYNDIG1Q9H7V2 258 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 MRPL47Q9HD33 250 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 PCDHGA8Q9Y5G5 932 aa13.87□□□□□ -0.19
GTF3C1-211ENST00000569653 D6RAR5 112 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 MAP3K6O95382 1288 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 SOD1P00441 154 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 CPP00450 1065 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 RPLP0P05388 317 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 PDHA1P08559 390 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 HOXC4P09017 264 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ALPIP09923 528 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 HGFP14210 728 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 HTR1BP28222 390 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ETV3P41162 512 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 RPIAP49247 311 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 BLKP51451 505 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ZNF135P52742 658 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ZNF235Q14590 738 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 ACOX1Q15067 660 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 BOLA3Q53S33 107 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 TDRD12Q587J7 1177 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 FOXR1Q6PIV2 292 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 GPR155Q7Z3F1 870 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 CLEC14AQ86T13 490 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 LSMEM2Q8N112 164 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 LZTR1Q8N653 840 aa13.86□□□□□ -0.19
GTF3C1-211ENST00000569653 TPCN2Q8NHX9 752 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms