RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RALYQ9UKM9 306 aaKnown RBP7.85□□□□□ -1.15
CDH3-209ENST00000569080 CLCA2Q9UQC9 943 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 RAXQ9Y2V3 346 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PPIL1Q9Y3C6 166 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 PCDHB1Q9Y5F3 818 aa7.85□□□□□ -1.15
CDH3-209ENST00000569080 SCN8AQ9UQD0 1980 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 KALRNO60229 2985 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 A0A087WV48 116 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 A0A1W2PNU3 283 aaPredicted RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 A0A1W2PQ67 120 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TMEM202A6NGA9 273 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 YY2O15391 372 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TLX3O43711 291 aaPredicted RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 AKR1B10O60218 316 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 OPA1O60313 960 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 MT-CO3P00414 261 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 SOD1P00441 154 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 HLA-DQB2P05538 268 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 PDHA1P08559 390 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 KRT7P08729 469 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 HOXC4P09017 264 aaPredicted RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 JUPP14923 745 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 VIPR1P32241 457 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 SSR1P43307 286 aaKnown RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 POLR2LP62875 67 aaKnown RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 DSC2Q02487 901 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 PPARDQ03181 441 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 NIPAL4Q0D2K0 466 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 C1orf61Q13536 156 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 CDKN3Q16667 212 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 PERM1Q5SV97 790 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 SLC9A4Q6AI14 798 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 HSD11B1LQ7Z5J1 315 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TSPAN33Q86UF1 283 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 VSIG1Q86XK7 387 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TC2NQ8N9U0 490 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 KYQ8NBH2 561 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 SLC35G2Q8TBE7 412 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 ARRDC2Q8TBH0 407 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 IFI44Q8TCB0 444 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 LRRN4Q8WUT4 740 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TSACCQ96A04 125 aaPredicted RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 DTD2Q96FN9 168 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 OLFM3Q96PB7 478 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 RNF157Q96PX1 679 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 RBM15Q96T37 977 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDH3-209ENST00000569080 SEMA3CQ99985 751 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 APOOQ9BUR5 198 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 LGR4Q9BXB1 951 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 TDRD1Q9BXT4 1180 aaKnown RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 SLC13A1Q9BZW2 595 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 NRSN2Q9GZP1 204 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 POLR1EQ9GZS1 481 aaKnown RBP7.84□□□□□ -1.15
CDH3-209ENST00000569080 DEF6Q9H4E7 631 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 NT5MQ9NPB1 228 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 DGKBQ9Y6T7 804 aa7.84□□□□□ -1.15
CDH3-209ENST00000569080 CACNA1GO43497 2377 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 PTPRQQ9UMZ3 2332 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 A0A0U1RQS6 177 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 CAPN8A6NHC0 703 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 TMEM110-MUSTN1A8MSY1 372 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 A8MX80 341 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 AKR1B15C9JRZ8 316 aaPredicted RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 PSMD11O00231 422 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 MATN3O15232 486 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 RASGRP1O95267 797 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 PRLP01236 227 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 MMP2P08253 660 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ALPIP09923 528 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 TGM2P21980 687 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 KDELR1P24390 212 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 CCNCP24863 283 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 HTR1BP28222 390 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ETV3P41162 512 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 BLKP51451 505 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 SRP54P61011 504 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 E2F1Q01094 437 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 PPIDQ08752 370 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 ZBTB17Q13105 803 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 MESDQ14696 234 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 NR0B2Q15466 257 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 TAZQ16635 292 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 IFI16Q16666 785 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 HS1BP3Q53T59 392 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ARMC12Q5T9G4 340 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 LRRC38Q5VT99 294 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 TIGD7Q6NT04 549 aaPredicted RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 PNCKQ6P2M8 343 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 ENPP7Q6UWV6 458 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 RFLNAQ6ZTI6 216 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 EFL1Q7Z2Z2 1120 aaKnown RBP7.83□□□□□ -1.16
CDH3-209ENST00000569080 TECPR1Q7Z6L1 1165 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 HEATR4Q86WZ0 1026 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 HID1Q8IV36 788 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 CNGA4Q8IV77 575 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 SFTPA2Q8IWL1 248 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 RHOT2Q8IXI1 618 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 BBS5Q8N3I7 341 aa7.83□□□□□ -1.16
CDH3-209ENST00000569080 FSTL5Q8N475 847 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms