RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 MFSD11O43934 449 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 TPM3P06753 285 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 CD48P09326 243 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 CNGA3Q16281 694 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
CPNE7-209ENST00000568977 LVRNQ6Q4G3 990 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 RBM44Q6ZP01 1051 aaKnown RBP18.65■□□□□ 0.58
CPNE7-209ENST00000568977 GKN2Q86XP6 184 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 SDR16C5Q8N3Y7 309 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 FAM71BQ8TC56 605 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 SCG3Q8WXD2 468 aaKnown RBP18.65■□□□□ 0.58
CPNE7-209ENST00000568977 OR1E3Q8WZA6 343 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 RBM15Q96T37 977 aaKnown RBP eCLIP18.65■□□□□ 0.584e-8■■■■□ 19.9
CPNE7-209ENST00000568977 CCDC3Q9BQI4 270 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 WDR26Q9H7D7 661 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 SYNDIG1Q9H7V2 258 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 PADI4Q9UM07 663 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 DGKBQ9Y6T7 804 aa18.65■□□□□ 0.58
CPNE7-209ENST00000568977 TMEM202A6NGA9 273 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 CASC3O15234 703 aaKnown RBP18.64■□□□□ 0.57
CPNE7-209ENST00000568977 TCEA3O75764 348 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 DXOO77932 396 aaKnown RBP18.64■□□□□ 0.57
CPNE7-209ENST00000568977 TNFP01375 233 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 PTMSP20962 102 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 KELP23276 732 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 IL4RP24394 825 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 VIPR1P32241 457 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 ARSEP51690 589 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 C3orf38Q5JPI3 329 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 RALGPS1Q5JS13 557 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 MARC1Q5VT66 337 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 LSMEM2Q8N112 164 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 PELI3Q8N2H9 469 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 OR56A4Q8NGH8 313 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 NUS1Q96E22 293 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 COQ10AQ96MF6 247 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 POLR1BQ9H9Y6 1135 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 MRPL40Q9NQ50 206 aaKnown RBP18.64■□□□□ 0.57
CPNE7-209ENST00000568977 CTTNBP2NLQ9P2B4 639 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 GULP1Q9UBP9 304 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 GPR34Q9UPC5 381 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.64■□□□□ 0.577e-10■□□□□ 10.1
CPNE7-209ENST00000568977 ENTPD2Q9Y5L3 495 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 NBEAQ8NFP9 2946 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 ATRXP46100 2492 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 LOC400499M0QZD8 3231 aa18.64■□□□□ 0.57
CPNE7-209ENST00000568977 HEXIM1O94992 359 aaKnown RBP18.63■□□□□ 0.57
CPNE7-209ENST00000568977 LHCGRP22888 699 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 NFKBIAP25963 317 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 HNRNPH3P31942 346 aaKnown RBP18.63■□□□□ 0.57
CPNE7-209ENST00000568977 LSSP48449 732 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 PCBP4P57723 403 aaKnown RBP18.63■□□□□ 0.57
CPNE7-209ENST00000568977 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 SPIDRQ14159 915 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 DPYSL3Q14195 570 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 NCBP2-AS2Q69YL0 99 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 WDR48Q8TAF3 677 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 CTNNBL1Q8WYA6 563 aaPredicted RBP18.63■□□□□ 0.57
CPNE7-209ENST00000568977 CCDC74AQ96AQ1 378 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 ATXN7L3BQ96GX2 97 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 ZNF578Q96N58 590 aaPredicted RBP18.63■□□□□ 0.57
CPNE7-209ENST00000568977 LGMNQ99538 433 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 ZNF670Q9BS34 389 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 LGR4Q9BXB1 951 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 PACSIN1Q9BY11 444 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 NT5MQ9NPB1 228 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 SATB2Q9UPW6 733 aa18.63■□□□□ 0.57
CPNE7-209ENST00000568977 ARHGEF17Q96PE2 2063 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 NPIPB15A6NHN6 443 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 PROSCO94903 275 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 PGLSO95336 258 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 HOXC4P09017 264 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 CYP2A6P11509 494 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 TRIM23P36406 574 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 GARSP41250 739 aaKnown RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 PDX1P52945 283 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 GALNT2Q10471 571 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 ATP13A4Q4VNC1 1196 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 SOWAHCQ53LP3 525 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 DENND2CQ68D51 928 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 PNCKQ6P2M8 343 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 LRRC49Q8IUZ0 686 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 ZNF248Q8NDW4 579 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 DTD2Q96FN9 168 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 HIC2Q96JB3 615 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 MCCC1Q96RQ3 725 aaPredicted RBP18.62■□□□□ 0.57
CPNE7-209ENST00000568977 ASCL3Q9NQ33 180 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 UVRAGQ9P2Y5 699 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 RABGEF1Q9UJ41 708 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 PHTF1Q9UMS5 762 aa18.62■□□□□ 0.57
CPNE7-209ENST00000568977 A0A1W2PNU3 283 aaPredicted RBP18.61■□□□□ 0.57
CPNE7-209ENST00000568977 PSMD11O00231 422 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 TNFRSF10CO14798 259 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 MAP3K6O95382 1288 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 H2AFZP0C0S5 128 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 MYCLP1P12525 358 aaPredicted RBP18.61■□□□□ 0.57
CPNE7-209ENST00000568977 TAS2R40P59535 323 aa18.61■□□□□ 0.57
CPNE7-209ENST00000568977 ERVPABLB-1P60509 514 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms