RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ELFN1P0C7U0 828 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CCNB1P14635 433 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CD1CP29017 333 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 EPHB2P29323 1055 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 TRIM23P36406 574 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 MTIF2P46199 727 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 LIMK2P53671 638 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 HDAC4P56524 1084 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 YBEYP58557 167 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 RAB15P59190 212 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 NOMO3P69849 1222 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 RALGDSQ12967 914 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CYTH1Q15438 398 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CCDC14Q49A88 953 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 ZSWIM9Q86XI8 627 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CCDC185Q8N715 623 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 ZDHHC1Q8WTX9 485 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 RXFP2Q8WXD0 754 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 NTAN1Q96AB6 310 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 SLC45A3Q96JT2 553 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 GSDMCQ9BYG8 508 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 MAGEB5Q9BZ81 275 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CARS2Q9HA77 564 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 SPATS2LQ9NUQ6 558 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 UBA2Q9UBT2 640 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 SDK2Q58EX2 2172 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 C2CD4BA6NLJ0 364 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 RASA4BC9J798 803 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 RASA4O43374 803 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 ECEL1O95672 775 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 THRAP10827 490 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 SERPINA4P29622 427 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 PTPN9P43378 593 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 DCAF12Q5T6F0 453 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 LIPIQ6XZB0 460 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 NOP9Q86U38 636 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 FAM129CQ86XR2 697 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 CAMK1DQ8IU85 385 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 EPS8L1Q8TE68 723 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 FAM172AQ8WUF8 416 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 KIAA1143Q96AT1 154 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 DPYSL5Q9BPU6 564 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 EFHD1Q9BUP0 239 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 LGR4Q9BXB1 951 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 ATP13A3Q9H7F0 1226 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 GPN2Q9H9Y4 310 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 SLC39A1Q9NY26 324 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 PLAAQ9Y263 795 aa11.83□□□□□ -0.52
GTF3C1-209ENST00000568569 LRRK1Q38SD2 2015 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 LRP4O75096 1905 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 BLACEA4D250 179 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 B4E171 279 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 NKX2-8O15522 239 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 BUB1BO60566 1050 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 FGF1P05230 155 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 MMEP08473 750 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 PRKAR1AP10644 381 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 MYCLP1P12525 358 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 MMP8P22894 467 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 CSF2RBP32927 897 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 TSPAN7P41732 249 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 CDC20Q12834 499 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 PEX6Q13608 980 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 SEPT6Q14141 434 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 AFMIDQ63HM1 303 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 SLFN11Q7Z7L1 901 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 ATCAYQ86WG3 371 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 NRROSQ86YC3 692 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 CENPIQ92674 756 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 TEFMQ96QE5 360 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 ZMYND15Q9H091 742 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 CATSPERBQ9H7T0 1116 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 LRRC4CQ9HCJ2 640 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 TRNAU1APQ9NX07 287 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 PILRAQ9UKJ1 303 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 FHOD1Q9Y613 1164 aa11.82□□□□□ -0.52
GTF3C1-209ENST00000568569 ZFC3H1O60293 1989 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 EFCAB7A8K855 629 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 WASH4PA8MWX3 477 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 TEX33O43247 280 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 AK4P27144 223 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 MAN1A1P33908 653 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 POLR2LP62875 67 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 SQSTM1Q13501 440 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms