RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 MAGEA1P43355 309 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 ZNF75DP51815 510 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 INSM1Q01101 510 aaPredicted RBP12.72□□□□□ -0.37
HERC2-206ENST00000564519 NIPAL4Q0D2K0 466 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
HERC2-206ENST00000564519 ILKQ13418 452 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 MTM1Q13496 603 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 NFATC4Q14934 902 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 ACOX1Q15067 660 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 TCEAL1Q15170 157 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
HERC2-206ENST00000564519 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 PRRT3Q5FWE3 981 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 FAXCQ5TGI0 409 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 TSPAN33Q86UF1 283 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 LRRC49Q8IUZ0 686 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 FAM181AQ8N9Y4 354 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 ARRDC2Q8TBH0 407 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 PIH1D2Q8WWB5 315 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 COQ10AQ96MF6 247 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
HERC2-206ENST00000564519 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 LGMNQ99538 433 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 DUSP23Q9BVJ7 150 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 SPASTQ9UBP0 616 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 PHTF1Q9UMS5 762 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 CSNK1G3Q9Y6M4 447 aa12.72□□□□□ -0.37
HERC2-206ENST00000564519 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 PLXNB3Q9ULL4 1909 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 NPIPB15A6NHN6 443 aaPredicted RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 TOR1BO14657 336 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 CASC3O15234 703 aaKnown RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 FZD6O60353 706 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 KRT1P04264 644 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 ALPIP09923 528 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 CCNCP24863 283 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 ETV3P41162 512 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 PEX5P50542 639 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 PPARDQ03181 441 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 ALG1LQ6GMV1 187 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 TIGD7Q6NT04 549 aaPredicted RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 NPNTQ6UXI9 565 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 HID1Q8IV36 788 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 PDXPQ96GD0 296 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 LGR4Q9BXB1 951 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 SLC13A1Q9BZW2 595 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 POLR1EQ9GZS1 481 aaKnown RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
HERC2-206ENST00000564519 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
HERC2-206ENST00000564519 ITPR1Q14643 2758 aa12.71□□□□□ -0.38
HERC2-206ENST00000564519 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
HERC2-206ENST00000564519 A0A1W2PQ67 120 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 TMEM202A6NGA9 273 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 KCNK1O00180 336 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 YY2O15391 372 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 LCA5LO95447 670 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 JCHAINP01591 159 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 CCNB1P14635 433 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 MX2P20592 715 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 SLC1A1P43005 524 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 HK3P52790 923 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 SRP54P61011 504 aaKnown RBP12.7□□□□□ -0.38
HERC2-206ENST00000564519 ZBTB17Q13105 803 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 LLGL1Q15334 1064 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 CDKN3Q16667 212 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 ZCCHC8Q6NZY4 707 aaKnown RBP12.7□□□□□ -0.38
HERC2-206ENST00000564519 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 CNTD1Q8N815 330 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 IFI44Q8TCB0 444 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 OR1E3Q8WZA6 343 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 FATE1Q969F0 183 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 NUS1Q96E22 293 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 SCRN2Q96FV2 425 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 MCCC1Q96RQ3 725 aaPredicted RBP12.7□□□□□ -0.38
HERC2-206ENST00000564519 IL12RB2Q99665 862 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 CEP41Q9BYV8 373 aa12.7□□□□□ -0.38
HERC2-206ENST00000564519 NRSN2Q9GZP1 204 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms