RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KRT7P08729 469 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 LHCGRP22888 699 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 VIPR1P32241 457 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 GBE1Q04446 702 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 PDK2Q15119 407 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 PTPRRQ15256 657 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 NR0B2Q15466 257 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 TSR1Q2NL82 804 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 C6orf132Q5T0Z8 1188 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 DENND2CQ68D51 928 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 C19orf48Q6RUI8 117 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 SPOCK2Q92563 424 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 FUBP1Q96AE4 644 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 NUS1Q96E22 293 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 SEMA3CQ99985 751 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 NHEJ1Q9H9Q4 299 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 FGF22Q9HCT0 170 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 SALL4Q9UJQ4 1053 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 LHX6Q9UPM6 363 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 TTLL3Q9Y4R7 772 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 AK5Q9Y6K8 562 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 IGSF10Q6WRI0 2623 aa17.25■□□□□ 0.35
CDC42BPB-208ENST00000561271 NPIPB15A6NHN6 443 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 YY2O15391 372 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 HEXIM1O94992 359 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 PGLSO95336 258 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 CTSEP14091 401 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 CTPS1P17812 591 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 BLKP51451 505 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 KIAA1024LP59773 190 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 SRP54P61011 504 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 DSC2Q02487 901 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 ITKQ08881 620 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 RALGPS1Q5JS13 557 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 PERM1Q5SV97 790 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 CDCP2Q5VXM1 449 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 FSTL5Q8N475 847 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 TEX26Q8N6G2 289 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 KYQ8NBH2 561 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 SLC35G2Q8TBE7 412 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 OR1E3Q8WZA6 343 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 RAPGEF5Q92565 580 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 CCDC42Q96M95 316 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 COQ10AQ96MF6 247 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 NRSN2Q9GZP1 204 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 MRPL40Q9NQ50 206 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 NCKIPSDQ9NZQ3 722 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 LCMT1Q9UIC8 334 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
CDC42BPB-208ENST00000561271 A0A1W2PQ67 120 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 LRRD1A4D1F6 860 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 TMEM202A6NGA9 273 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 CACNB4O00305 520 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 CASC3O15234 703 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 CSO75390 466 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ALPIP09923 528 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 TGM2P21980 687 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ELOCQ15369 112 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 IFI16Q16666 785 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ARMC12Q5T9G4 340 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ESRP1Q6NXG1 681 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 HSD11B1LQ7Z5J1 315 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 MAP7D3Q8IWC1 876 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 CACTIN-AS1Q8N1I8 211 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 MAML1Q92585 1016 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 DCBLD2Q96PD2 775 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 SMIM14Q96QK8 99 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 LGR4Q9BXB1 951 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 POLR1EQ9GZS1 481 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 ABCG4Q9H172 646 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 WDR26Q9H7D7 661 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 RAI2Q9Y5P3 530 aa17.23■□□□□ 0.35
CDC42BPB-208ENST00000561271 A0A0U1RQS6 177 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 EME2A4GXA9 379 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 BRINP1O60477 761 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 HLA-DQB2P05538 268 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 PDHA1P08559 390 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 CYP2A6P11509 494 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 KDELR1P24390 212 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 ETV3P41162 512 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 SLC10A2Q12908 348 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 IHHQ14623 411 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 RTP5Q14D33 572 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 TIGD7Q6NT04 549 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 OR56A4Q8NGH8 313 aa17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 HNRNPLLQ8WVV9 542 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-208ENST00000561271 GLMNQ92990 594 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms