RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 SMYD2Q9NRG4 433 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 CXorf49A8MYA2 514 aaPredicted RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 TNFRSF10AO00220 468 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 TRAFD1O14545 582 aaPredicted RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 MDH1P40925 334 aaKnown RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 TRAF2Q12933 501 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 GRM3Q14832 879 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 CRYMQ14894 314 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 SPANXN3Q5MJ09 141 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 CERCAMQ5T4B2 595 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 BMP8AQ7Z5Y6 402 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 CAMK1DQ8IU85 385 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 TMIEQ8NEW7 156 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 IPMKQ8NFU5 416 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 GRIN3AQ8TCU5 1115 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 MZB1Q8WU39 189 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 FICDQ9BVA6 458 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 SUV39H2Q9H5I1 410 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ATP13A3Q9H7F0 1226 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 FBRSQ9HAH7 460 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ZNF180Q9UJW8 692 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 PCDHGC4Q9Y5F7 938 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 RAI2Q9Y5P3 530 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 HTRA2O43464 458 aaPredicted RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 SOCS5O75159 536 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 PMPCBO75439 489 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 PIAS1O75925 651 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 PRNPP04156 253 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 CREB1P16220 341 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 DGKEP52429 567 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 WNT3AP56704 352 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 SATB1Q01826 763 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 BCL2L1Q07817 233 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ARMC3Q5W041 872 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 GDPD4Q6W3E5 623 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 MAMSTRQ6ZN01 415 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 SLC26A11Q86WA9 606 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 LRRC6Q86X45 466 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 MMAAQ8IVH4 418 aaKnown RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 PIP4K2CQ8TBX8 421 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ECHDC3Q96DC8 303 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ZNF641Q96N77 438 aaPredicted RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 OSBPL1AQ9BXW6 950 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.62■□□□□ 0.25
TPM1-219ENST00000559397 SENP1Q9P0U3 644 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 SAMD15Q9P1V8 674 aa16.62■□□□□ 0.25
TPM1-219ENST00000559397 FZD6O60353 706 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 USP1O94782 785 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 SLC34A2O95436 690 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 IL1BP01584 269 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 UGT2B4P06133 528 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 POLBP06746 335 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 SERPINA4P29622 427 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 METAP1P53582 386 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
TPM1-219ENST00000559397 DSG4Q86SJ6 1040 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 TMPRSS6Q8IU80 811 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 PBXIP1Q96AQ6 731 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 MRRFQ96E11 262 aaKnown RBP16.61■□□□□ 0.25
TPM1-219ENST00000559397 FCRL3Q96P31 734 aaPredicted RBP16.61■□□□□ 0.25
TPM1-219ENST00000559397 KIFC1Q9BW19 673 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 TDRD1Q9BXT4 1180 aaKnown RBP16.61■□□□□ 0.25
TPM1-219ENST00000559397 SLC6A17Q9H1V8 727 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 POLMQ9NP87 494 aaPredicted RBP16.61■□□□□ 0.25
TPM1-219ENST00000559397 SOX13Q9UN79 622 aa16.61■□□□□ 0.25
TPM1-219ENST00000559397 TCRBV21S2A2A0A5A6 115 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
TPM1-219ENST00000559397 FAM155BO75949 473 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 PRLP01236 227 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 INHBAP08476 426 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 TPH1P17752 444 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 GUCY1A3Q02108 690 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 CST6Q15828 149 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 ANKRD20A4Q4UJ75 823 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 ZNF776Q68DI1 518 aaPredicted RBP16.6■□□□□ 0.25
TPM1-219ENST00000559397 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
TPM1-219ENST00000559397 PPM1NQ8N819 430 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 CENPTQ96BT3 561 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 MRGPRX1Q96LB2 322 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 KLHL32Q96NJ5 620 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 TRIB3Q96RU7 358 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 RPS6KL1Q9Y6S9 549 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
TPM1-219ENST00000559397 ZCWPW2A0A1B0GU75 182 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 LOC285095A0A1B0GVY8 99 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 TSPAN11A1L157 253 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 C1QTNF3-AMACRE9PGA6 284 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PGLSO95336 258 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PDHA1P08559 390 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 BRAFP15056 766 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 GABRG2P18507 467 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 NDUFV2P19404 249 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PSMD8P48556 350 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 GNGT1P63211 74 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 NAB1Q13506 487 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 PCSK7Q16549 785 aa16.59■□□□□ 0.25
TPM1-219ENST00000559397 ZNF805Q5CZA5 627 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms