RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 FAM114A1Q8IWE2 563 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 DRC7Q8IY82 874 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ZDHHC1Q8WTX9 485 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CASKIN2Q8WXE0 1202 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 OR1E3Q8WZA6 343 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 NT5C3BQ969T7 300 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 THAP11Q96EK4 314 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 DHTKD1Q96HY7 919 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 SPATA32Q96LK8 384 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 GDAP1L1Q96MZ0 367 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 GSDMAQ96QA5 445 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 NUDT22Q9BRQ3 303 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 GSDMCQ9BYG8 508 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 TTYH3Q9C0H2 523 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 TMEM168Q9H0V1 697 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 MAGEH1Q9H213 219 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 SUV39H2Q9H5I1 410 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CYP4F12Q9HCS2 524 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ANLNQ9NQW6 1124 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 SPATS2LQ9NUQ6 558 aaKnown RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 OCIAD1Q9NX40 245 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 PILRAQ9UKJ1 303 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 PCDHGC3Q9UN70 934 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 SRPK3Q9UPE1 567 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 TP53TG5Q9Y2B4 290 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 COQ6Q9Y2Z9 468 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 MFHAS1Q9Y4C4 1052 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 DAAM1Q9Y4D1 1078 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ACTL7AQ9Y615 435 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 UBR5O95071 2799 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 USP9YO00507 2555 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 LOC101059948A0A1B0GTJ6 334 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 TRIM49BA6NDI0 452 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 TMEM202A6NGA9 273 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 I6L893 689 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 PSMA7O14818 248 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ECEL1O95672 775 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 GNA14O95837 355 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ERBB2P04626 1255 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PRKCGP05129 697 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 HSP90AA1P07900 732 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 CCNB1P14635 433 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 RHOQP17081 205 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 MPSTP25325 297 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ELAVL4P26378 380 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 OAS2P29728 719 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 TRIM23P36406 574 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PPP1R2P41236 205 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 MAPKAPK2P49137 400 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PPM1FP49593 454 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 LIG3P49916 1009 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PMS1P54277 932 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 MAZP56270 477 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 RHOAP61586 193 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 KRT85P78386 507 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 GPLD1P80108 840 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 MC2RQ01718 297 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ILF3Q12906 894 aaKnown RBP eCLIP5.2□□□□□ -1.58
SPG11-208ENST00000558155 UGP2Q16851 508 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ARHGAP44Q17R89 818 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 INO80DQ53TQ3 878 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 ATXN7L2Q5T6C5 722 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 NKAIN2Q5VXU1 208 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ANKS6Q68DC2 871 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 SMYD5Q6GMV2 418 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 RWDD4Q6NW29 188 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 BRAT1Q6PJG6 821 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 FOXR2Q6PJQ5 311 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 OLFML1Q6UWY5 402 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 MAMDC2Q7Z304 686 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 PASD1Q8IV76 773 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 SFTPA2Q8IWL1 248 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ESX1Q8N693 406 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 TMEM35BQ8NCS4 154 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 CCL4L1Q8NHW4 92 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 CPT1CQ8TCG5 803 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 STARD8Q92502 1023 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PMEPA1Q969W9 287 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 FUBP1Q96AE4 644 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 C18orf8Q96DM3 657 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 RTP4Q96DX8 246 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PDXPQ96GD0 296 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 AHCYL2Q96HN2 611 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 ZNF641Q96N77 438 aaPredicted RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 TBCBQ99426 244 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 NCAPGQ9BPX3 1015 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 SPRY4Q9C004 299 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PDCL3Q9H2J4 239 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 PCDH12Q9NPG4 1184 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ACP6Q9NPH0 428 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 MRPL40Q9NQ50 206 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 FBXO8Q9NRD0 319 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 TRNAU1APQ9NX07 287 aaKnown RBP5.2□□□□□ -1.58
SPG11-208ENST00000558155 KCTD5Q9NXV2 234 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 TAAR2Q9P1P5 351 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 ZNF212Q9UDV6 495 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 OR12D3Q9UGF7 316 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 DNAI1Q9UI46 699 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 POLHQ9Y253 713 aa5.2□□□□□ -1.58
SPG11-208ENST00000558155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms