RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TRBV23-1A0A0A0MS06 115 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 A0A1W2PR77 199 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FAM47DPA6NHR8 397 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 TMEM110-MUSTN1A8MSY1 372 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 K7ENP7 123 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 KIF2AO00139 706 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CEP104O60308 925 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MTRF1O75570 445 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 STC2O76061 302 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 WNT1P04628 370 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 RALAP11233 206 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 COL6A2P12110 1019 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 TNNI1P19237 187 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 RANBP1P43487 201 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CCR5P51681 352 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 GALCP54803 685 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 INHBCP55103 352 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MAP3K7CLP57077 242 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 NXPH1P58417 271 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 GABREP78334 506 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 ASIC1P78348 528 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FNDC3BQ53EP0 1204 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 COBLL1Q53SF7 1204 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FAM209AQ5JX71 171 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 C10orf120Q5SQS8 335 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 ZNF776Q68DI1 518 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 INO80CQ6PI98 192 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 KDM7AQ6ZMT4 941 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 B3GNT8Q7Z7M8 397 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 PCGF5Q86SE9 256 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 LRRC49Q8IUZ0 686 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 SCUBE1Q8IWY4 988 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FUKQ8N0W3 1084 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CRYBG2Q8N1P7 616 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FAM26EQ8N5C1 309 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 GANCQ8TET4 914 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 DDI1Q8WTU0 396 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 SORCS1Q8WY21 1168 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 NACC2Q96BF6 587 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CENPTQ96BT3 561 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 DTNBP1Q96EV8 351 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 C1orf159Q96HA4 380 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CDK5RAP1Q96SZ6 601 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 SMOQ99835 787 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MMADHCQ9H3L0 296 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 PRSS16Q9NQE7 514 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 OLFML3Q9NRN5 406 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 OSER1Q9NX31 292 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MKS1Q9NXB0 559 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 FBXL12Q9NXK8 326 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 QPCTLQ9NXS2 382 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CLIC5Q9NZA1 410 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 MYOTQ9UBF9 498 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 PPARGC1AQ9UBK2 798 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 CLEC4EQ9ULY5 219 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 WDR37Q9Y2I8 494 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 SCINQ9Y6U3 715 aa5.02□□□□□ -1.61
ATXN3-247ENST00000557311 TNRC6BQ9UPQ9 1833 aaKnown RBP5.02□□□□□ -1.61
ATXN3-247ENST00000557311 PTPRDP23468 1912 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 CITO14578 2027 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 A0A1B0GTL3 188 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 MDM4O15151 490 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 OPA1O60313 960 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 RNASEH1O60930 286 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 USP12O75317 370 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 BEST1O76090 585 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 BMP15O95972 392 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 FAM153BP0C7A2 387 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 SFTPCP11686 197 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 MYCLP1P12525 358 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 GP1BBP13224 206 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 GRK2P25098 689 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 RBMS1P29558 406 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
ATXN3-247ENST00000557311 MAN1A1P33908 653 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 GRK3P35626 688 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 KCNC1P48547 511 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 PSMD7P51665 324 aa5.01□□□□□ -1.61
ATXN3-247ENST00000557311 MYL6P60660 151 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms