RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 A0A1W2PPH5 198 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE7O76087 117 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 ZBTB11O95625 1053 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE12FP0CL80 117 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE12GP0CL81 117 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE12IP0CL82 117 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 UBL4AP11441 157 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 EIF2S3P41091 472 aaKnown RBP4.63□□□□□ -1.67
SCFD1-221ENST00000556534 CCR9P51686 369 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 BRWD1-AS2P59051 145 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE1Q13065 139 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GAGE4Q13068 117 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 MYBPHQ13203 477 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 NEDD9Q14511 834 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 GSTA3Q16772 222 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 C2orf68Q2NKX9 166 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 COL28A1Q2UY09 1125 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 AMZ1Q400G9 498 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 PAPPA-AS1Q5QFB9 102 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 PLEKHA7Q6IQ23 1121 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 CDC73Q6P1J9 531 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 RTP4Q96DX8 246 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 SLC41A2Q96JW4 573 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 FAM84BQ96KN1 310 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-221ENST00000556534 ZNF570Q96NI8 536 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 CTAGE1Q96RT6 745 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 FAM110AQ9BQ89 295 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 KCNN2Q9H2S1 579 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 C6orf106Q9H6K1 298 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-221ENST00000556534 SCPEP1Q9HB40 452 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 TINAGQ9UJW2 476 aa4.63□□□□□ -1.67
SCFD1-221ENST00000556534 FBXO9Q9UK97 447 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-221ENST00000556534 IGLV5-37A0A075B6J1 123 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 hDV102S1A0JD36 115 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 TTC36A6NLP5 189 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 LRRC53A6NM62 1247 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 B4E171 279 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 SEC14L2O76054 403 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 TMEM63AO94886 807 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 RTN3O95197 1032 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 FTCDO95954 541 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 CD4P01730 458 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 MAOAP21397 527 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 PAX3P23760 479 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 KRT9P35527 623 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 TSPAN7P41732 249 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 FOXD4Q12950 439 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 EIF2S3LQ2VIR3 472 aaKnown RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 PRSS57Q6UWY2 283 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 ATF7IPQ6VMQ6 1270 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 LILRB1Q8NHL6 650 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 CREB3L4Q8TEY5 395 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 PSPC1Q8WXF1 523 aaKnown RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 GTF3C6Q969F1 213 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 PERPQ96FX8 193 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 SCMH1Q96GD3 660 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 STRA6Q9BX79 667 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 RANBP17Q9H2T7 1088 aaKnown RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 SLCO5A1Q9H2Y9 848 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 C17orf75Q9HAS0 396 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 CNGB3Q9NQW8 809 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 ASAH2Q9NR71 780 aa4.62□□□□□ -1.67
SCFD1-221ENST00000556534 AAR2Q9Y312 384 aaKnown RBP4.62□□□□□ -1.67
SCFD1-221ENST00000556534 SOCS6O14544 535 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 ACOT8O14734 319 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PLRG1O43660 514 aaKnown RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PAGE4O60829 102 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 AFPP02771 609 aaKnown RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 CLEC3BP05452 202 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 G6PDP11413 515 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PIP4K2AP48426 406 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 RPL7AP62424 266 aaKnown RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 OLR1P78380 273 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 SORDQ00796 357 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 ECT2LQ008S8 904 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 NAE1Q13564 534 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 OASLQ15646 514 aaKnown RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 TBCEQ15813 527 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 ATP13A5Q4VNC0 1218 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 CXorf66Q5JRM2 361 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 CAPRIN2Q6IMN6 1127 aaKnown RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 SPATA22Q8NHS9 363 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 LMO3Q8TAP4 145 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 ADGRG7Q96K78 797 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PPP1R13BQ96KQ4 1090 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 C7orf26Q96N11 449 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 CSF3RQ99062 836 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 C1QTNF5Q9BXJ0 243 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PRKRIP1Q9H875 184 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-221ENST00000556534 C1RLQ9NZP8 487 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 ZNF69Q9UC07 566 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 RCOR1Q9UKL0 485 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 PCDHGB1Q9Y5G3 927 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 NFS1Q9Y697 457 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 UTYO14607 1347 aa4.61□□□□□ -1.67
SCFD1-221ENST00000556534 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
SCFD1-221ENST00000556534 BTBD18B2RXH4 712 aa4.6□□□□□ -1.67
SCFD1-221ENST00000556534 KDM4BO94953 1096 aa4.6□□□□□ -1.67
SCFD1-221ENST00000556534 LINC00271P0C7V0 271 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms