RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ITKQ08881 620 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 BNIP1Q12981 228 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF235Q14590 738 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ZKSCAN8Q15776 578 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CNGA3Q16281 694 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 INO80DQ53TQ3 878 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 SIRPB2Q5JXA9 342 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 IL31Q6EBC2 164 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CXorf57Q6NSI4 855 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 NEPROQ6NW34 567 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ESRP1Q6NXG1 681 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 OTOP2Q7RTS6 562 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CIR1Q86X95 450 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CPXM2Q8N436 756 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 MRPL43Q8N983 215 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 HJURPQ8NCD3 748 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 GPR150Q8NGU9 434 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 OR6Y1Q8NGX8 325 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 RDH11Q8TC12 318 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 BRSK1Q8TDC3 778 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 C10orf82Q8WW14 230 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 MRPS31Q92665 395 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 VPS39Q96JC1 886 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 TRIB3Q96RU7 358 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 TRIM55Q9BYV6 548 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF334Q9HCZ1 680 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 THAP1Q9NVV9 213 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 SLC17A6Q9P2U8 582 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 DNMT3BQ9UBC3 853 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 UBA2Q9UBT2 640 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 OR51B4Q9Y5P0 310 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 MYO18AQ92614 2054 aaKnown RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 DOCK4Q8N1I0 1966 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 A0A096LPK6 155 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 LDB2O43679 373 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 DNAJC6O75061 913 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 LRG1P02750 347 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 DLDP09622 509 aaKnown RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 NEFHP12036 1026 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 HOXB8P17481 243 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 CDC25CP30307 473 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 BMPR1AP36894 532 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 CD151P48509 253 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 EPHA5P54756 1037 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 MAXP61244 160 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 POU4F1Q01851 419 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 UBE3AQ05086 875 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 BST1Q10588 318 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 STX3Q13277 289 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 SETDB1Q15047 1291 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 CYTH1Q15438 398 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 FASTKD1Q53R41 847 aaKnown RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 PPM1JQ5JR12 505 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 N4BP2L1Q5TBK1 243 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 MBLAC2Q68D91 279 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF354CQ86Y25 554 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 TMC8Q8IU68 726 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 KLHL23Q8NBE8 558 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 OR7D4Q8NG98 312 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 OR52K2Q8NGK3 314 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 OR13J1Q8NGT2 312 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 AUTS2Q8WXX7 1259 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 HERVK_113Q902F9 699 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 WBP2Q969T9 261 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 TMA16Q96EY4 203 aaKnown RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 IFT43Q96FT9 208 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 NUDCD1Q96RS6 583 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 C19orf43Q9BQ61 176 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 FEM1AQ9BSK4 669 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 CINPQ9BW66 212 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-235ENST00000556082 MFSD1Q9H3U5 465 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 KCNK4Q9NYG8 393 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 TMEM216Q9P0N5 145 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 COPG2Q9UBF2 871 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 MID2Q9UJV3 735 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 TLK1Q9UKI8 766 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 FBXO5Q9UKT4 447 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 RWDD3Q9Y3V2 267 aa8.34□□□□□ -1.07
ATXN3-235ENST00000556082 A0A087X1B8 175 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TRAV19A0A0A6YYK7 116 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 TYW5A2RUC4 315 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CFAP73A6NFT4 308 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 INSIG1O15503 277 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 H2AFYO75367 372 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 LUC7L3O95232 432 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SERPINE1P05121 402 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 FGF3P11487 239 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 CPA3P15088 417 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 DDX6P26196 483 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 GABRR2P28476 465 aa8.33□□□□□ -1.08
ATXN3-235ENST00000556082 GRNP28799 593 aaKnown RBP8.33□□□□□ -1.08
ATXN3-235ENST00000556082 SLC26A3P40879 764 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms