RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 LRMDAQ9H2I8 198 aa21.01■□□□□ 0.95
PRDM4-205ENST00000550376 SH3BP1Q9Y3L3 701 aa21.01■□□□□ 0.95
PRDM4-205ENST00000550376 A8MX80 341 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 PRR5-ARHGAP8B1AHC4 643 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 ZNF195O14628 629 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 MGRN1O60291 552 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 ARHGAP8P85298 464 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 SEMG2Q02383 582 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 TUBB3Q13509 450 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 KIAA0408Q6ZU52 694 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 CAMK1DQ8IU85 385 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 HJURPQ8NCD3 748 aaPredicted RBP21■□□□□ 0.95
PRDM4-205ENST00000550376 ALG14Q96F25 216 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 NSL1Q96IY1 281 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 TMEM106CQ9BVX2 250 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 COG4Q9H9E3 785 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 CD248Q9HCU0 757 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 LHX3Q9UBR4 397 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 GOLGA8QA0A0J9YX86 632 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 GOLGA8OA6NCC3 632 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 GOLGA8NF8WBI6 632 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 BNIP3LO60238 219 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 RPP40O75818 363 aaKnown RBP21■□□□□ 0.95
PRDM4-205ENST00000550376 CD70P32970 193 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 SKIV2L2P42285 1042 aaKnown RBP21■□□□□ 0.95
PRDM4-205ENST00000550376 HTRA4P83105 476 aaPredicted RBP21■□□□□ 0.95
PRDM4-205ENST00000550376 CMTM8Q8IZV2 173 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 TXNDC5Q8NBS9 432 aaKnown RBP21■□□□□ 0.95
PRDM4-205ENST00000550376 MYLIPQ8WY64 445 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 OSBPL1AQ9BXW6 950 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 TNKS2Q9H2K2 1166 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 INSL6Q9Y581 213 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 CEP290O15078 2479 aa21■□□□□ 0.95
PRDM4-205ENST00000550376 UBA6A0AVT1 1052 aaPredicted RBP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 ALPIP09923 528 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 HSPA8P11142 646 aaKnown RBP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 PMLP29590 882 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 CTNNB1P35222 781 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 SLC9B1Q4ZJI4 515 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 PHF21BQ96EK2 531 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 NUDCD1Q96RS6 583 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 C17orf80Q9BSJ5 609 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 KIAA1671Q9BY89 1806 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 ANKRD66B4E2M5 251 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 ARHGEF15O94989 841 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 PIGNO95427 931 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 ADH1AP07327 375 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 ESRRAP11474 423 aaPredicted RBP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 CD1EP15812 388 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 IRS1P35568 1242 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 TIAL1Q01085 375 aaKnown RBP eCLIP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 LIPMQ5VYY2 423 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 WDR55Q9H6Y2 383 aaPredicted RBP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 CATSPERZQ9NTU4 200 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 G3BP2Q9UN86 482 aaKnown RBP20.99■□□□□ 0.95
PRDM4-205ENST00000550376 HCFC2Q9Y5Z7 792 aa20.99■□□□□ 0.95
PRDM4-205ENST00000550376 TMEM233B4DJY2 109 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 LEFTY2O00292 366 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 NEMP1O14524 444 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 TLL1O43897 1013 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 ATP6V1G2O95670 118 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 HNRNPLP14866 589 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 CTSOP43234 321 aaPredicted RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 NTHL1P78549 312 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 TTC8Q8TAM2 541 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 EXT2Q93063 718 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 LBHD1Q9BQE6 289 aaPredicted RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 ALG9Q9H6U8 611 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 SAR1AQ9NR31 198 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 EVLQ9UI08 416 aaPredicted RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 ZDHHC2Q9UIJ5 367 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 TYW5A2RUC4 315 aaKnown RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 GFRA2O00451 464 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 PER2O15055 1255 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 JUNP05412 331 aaKnown RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 FMO4P31512 558 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 CLCN5P51795 746 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 ZNF140P52738 457 aaPredicted RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 ACVR1Q04771 509 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 RFTN1Q14699 578 aaPredicted RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 DBN1Q16643 649 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 TMEM240Q5SV17 173 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 PIANPQ8IYJ0 282 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 POF1BQ8WVV4 589 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 CLP1Q92989 425 aaKnown RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 MRPL46Q9H2W6 279 aaKnown RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 FKBPLQ9UIM3 349 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 LSM7Q9UK45 103 aaKnown RBP20.98■□□□□ 0.95
PRDM4-205ENST00000550376 FAM50BQ9Y247 325 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 FIS1Q9Y3D6 152 aa20.98■□□□□ 0.95
PRDM4-205ENST00000550376 CAPN14A8MX76 684 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 OR1I1O60431 355 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 ATP5HO75947 161 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 GLUD1P00367 558 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 TSPAN8P19075 237 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 NCF2P19878 526 aaPredicted RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 STK19P49842 368 aaPredicted RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 LMAN2Q12907 356 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 NCEH1Q6PIU2 408 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 LSMEM2Q8N112 164 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms