RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CLPTM1O96005 669 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 KPNA2P52292 529 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 IHHQ14623 411 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 OR4K2Q8NGD2 314 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 TM6SF2Q9BZW4 377 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 ANKRD6Q9Y2G4 727 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 BTN3A1O00481 513 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 MUSKO15146 869 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 TLR5O60602 858 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 NDUFS3O75489 264 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 NCK1P16333 377 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 STXBP5Q5T5C0 1151 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 RANBP10Q6VN20 620 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 TRIML2Q8N7C3 387 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 PSMD13Q9UNM6 376 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
PRPF40B-209ENST00000548825 H3BNX3 289 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 HGFP14210 728 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 DNAJB2P25686 324 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 HCAR3P49019 387 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 AGTR2P50052 363 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LIN52Q52LA3 116 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PGM2L1Q6PCE3 622 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM207Q6UWW9 146 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 SPPL2CQ8IUH8 684 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PTERQ96BW5 349 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 GPR62Q9BZJ7 368 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 NOL6Q9H6R4 1146 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 EML4Q9HC35 981 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 TCAF2A6NFQ2 919 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LIN7AO14910 233 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PIP5K1BO14986 540 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 ANGPT2O15123 496 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 FGF10O15520 208 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PSMD3O43242 534 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CRTAMO95727 393 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CTPS1P17812 591 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CHN2P52757 468 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 AIF1P55008 147 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 POU4F1Q01851 419 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 GRIK3Q13003 919 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 BIRC2Q13490 618 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 GRB7Q14451 532 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CNPY1Q3B7I2 92 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM259Q4ZIN3 620 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 AP1ARQ63HQ0 302 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 KIAA1841Q6NSI8 718 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 RBM44Q6ZP01 1051 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LCA5Q86VQ0 697 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 OR13J1Q8NGT2 312 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 SPPL2BQ8TCT7 592 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LIN28AQ9H9Z2 209 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 A0A1B0GTL3 188 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PRORSD1PA6NEY8 169 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 E5RI56 91 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CD3EAPO15446 510 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 GRIA2P42262 883 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CDH15P55291 814 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 CDKL1Q00532 357 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 LBRQ14739 615 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 TSNQ15631 228 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 AAGABQ6PD74 315 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 PAQR3Q6TCH7 311 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 MON1AQ86VX9 555 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 C2CD4AQ8NCU7 369 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 GRIN3AQ8TCU5 1115 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 APOL5Q9BWW9 433 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 IGSF5Q9NSI5 407 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 AP4S1Q9Y587 144 aa13.69□□□□□ -0.22
PRPF40B-209ENST00000548825 UBFD1O14562 309 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 OR1I1O60431 355 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 DIO3P55073 304 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CREB5Q02930 508 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 PTPRNQ16849 979 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 FAM171BQ6P995 826 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CILP2Q8IUL8 1156 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 CALML6Q8TD86 181 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 GPR78Q96P69 363 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 SMOC2Q9H3U7 446 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 ZMYM5Q9UJ78 669 aa13.68□□□□□ -0.22
PRPF40B-209ENST00000548825 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms