RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RNF34Q969K3 372 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 DCPSQ96C86 337 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ISOC1Q96CN7 298 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PHF21BQ96EK2 531 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SENP8Q96LD8 212 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PPP1R10Q96QC0 940 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 C9orf16Q9BUW7 83 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ADI1Q9BV57 179 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 TRIM62Q9BVG3 475 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CATSPERBQ9H7T0 1116 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ARNT2Q9HBZ2 717 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 AGPAT4Q9NRZ5 378 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SMOXQ9NWM0 555 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 RHBDL2Q9NX52 303 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 A0A0J9YYE9 177 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 TNPO2O14787 897 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PMPCBO75439 489 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SUPT7LO94864 414 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PAPSS2O95340 614 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 IGLV3-25P01717 112 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 FGF4P08620 206 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ALDOCP09972 364 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SMIM10L2AP0DMW4 78 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SMIM10L2BP0DMW5 78 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 FASP25445 335 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PSMA4P25789 261 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CHRNA4P43681 627 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PLK1P53350 603 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 FOXM1Q08050 763 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ILF2Q12905 390 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SEPT6Q14141 434 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC36A3Q495N2 470 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF789Q5FWF6 425 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 COQ5Q5HYK3 327 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CLEC6AQ6EIG7 209 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 RPS27LQ71UM5 84 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF554Q86TJ5 538 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CLVS1Q8IUQ0 354 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 EPHX4Q8IUS5 362 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 LRRC49Q8IUZ0 686 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CBR4Q8N4T8 237 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 GPRC5AQ8NFJ5 357 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF420Q8TAQ5 688 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 DQX1Q8TE96 717 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CYP2S1Q96SQ9 504 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC39A3Q9BRY0 314 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC39A8Q9C0K1 460 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 CD320Q9NPF0 282 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 RBM22Q9NW64 420 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 ACTR3BQ9P1U1 418 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 VWA7Q9Y334 891 aa9.91□□□□□ -0.82
SMARCD1-205ENST00000548573 PLXNB2O15031 1838 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 SAC3D1A6NKF1 404 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 MATN4O95460 622 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 GPIP06744 558 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 FCGR1AP12314 374 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 RAB15P59190 212 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 HERVK_113P63132 956 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 PRAMEP78395 509 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ATP6AP1Q15904 470 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 UNC50Q53HI1 259 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 BRMS1LQ5PSV4 323 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 MANEALQ5VSG8 457 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 KDELC1Q6UW63 502 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 SPRED1Q7Z699 444 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ISCA2Q86U28 154 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 CILP2Q8IUL8 1156 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC15A3Q8IY34 581 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF786Q8N393 782 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 TERB1Q8NA31 727 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ANKRD49Q8WVL7 239 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ABTB1Q969K4 478 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 C12orf43Q96C57 262 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 CENPNQ96H22 339 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 MYRFLQ96LU7 910 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 C3orf30Q96M34 536 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 DOK1Q99704 481 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ERVK-6Q9BXR3 956 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 MUC13Q9H3R2 512 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 AKTIPQ9H8T0 292 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 FBRSL1Q9HCM7 1045 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ATP13A1Q9HD20 1204 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 FAIMQ9NVQ4 179 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 EBF1Q9UH73 591 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 AURKCQ9UQB9 309 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF510Q9Y2H8 683 aa9.9□□□□□ -0.82
SMARCD1-205ENST00000548573 ATP6AP2A0A1C7CYW4 349 aa9.89□□□□□ -0.83
SMARCD1-205ENST00000548573 TTC24A2A3L6 582 aaPredicted RBP9.89□□□□□ -0.83
SMARCD1-205ENST00000548573 ANGPT2O15123 496 aa9.89□□□□□ -0.83
SMARCD1-205ENST00000548573 ZSCAN9O15535 394 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms