RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 LYPLA2O95372 231 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 STAG3L1P0CL83 205 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 MZF1P28698 734 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 HALP42357 657 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 OR2B6P58173 313 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 FUT2Q10981 343 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 FGD3Q5JSP0 725 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 MCOLN3Q8TDD5 553 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 PHF10Q8WUB8 498 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 TRUB1Q8WWH5 349 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 HAS1Q92839 578 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 GAKO14976 1311 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 GNB5O14775 395 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 IPO13O94829 963 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 DGKAP23743 735 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 IDH3AP50213 366 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SKIV2LQ15477 1246 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 IL17AQ16552 155 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 GPR180Q86V85 440 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 KAT5Q92993 513 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 WNT8BQ93098 351 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 NPAS2Q99743 824 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 EIF2B3Q9NR50 452 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 MAN2B2Q9Y2E5 1009 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 PAPPAQ13219 1627 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 BTN3A1O00481 513 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ACKR2O00590 384 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 UGT2B15P54855 530 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 OXCT1P55809 520 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF621Q6ZSS3 439 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 IRGQQ8WZA9 623 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 DNAJC1Q96KC8 554 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 CRISPLD1Q9H336 500 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 GLI3P10071 1580 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NCF1BA6NI72 391 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NCF1CA8MVU1 366 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NCF1P14598 390 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 PAX3P23760 479 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 PSMB4P28070 264 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 SEPHS1P49903 392 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TAS2R40P59535 323 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 DDX39BQ13838 428 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 Q3C1V9 767 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 FBXO47Q5MNV8 452 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 DDI2Q5TDH0 399 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TMEM53Q6P2H8 277 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ADGRA1Q86SQ6 560 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 CENPSQ8N2Z9 138 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 UBE2E3Q969T4 207 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 HAVCR1Q96D42 359 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF347Q96SE7 839 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 YME1L1Q96TA2 773 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 DNAJB9Q9UBS3 223 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 CNOT11Q9UKZ1 510 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TGFB1I1O43294 461 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ULK1O75385 1050 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ALDH1A1P00352 501 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 FEN1P39748 380 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NDST1P52848 882 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ATP12AP54707 1039 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 EEFSECP57772 596 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 OR52K1Q8NGK4 314 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 KCTD4Q8WVF5 259 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 ATL1Q8WXF7 558 aa12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NUSAP1Q9BXS6 441 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 NXF3Q9H4D5 531 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 RBMX2Q9Y388 322 aaKnown RBP12.82□□□□□ -0.36
PTCH1-212ENST00000546744 A0A087WZ62 844 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ARHGEF33A8MVX0 844 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 KCNK1O00180 336 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 RAP2AP10114 183 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 MTHFRP42898 656 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 RHDQ02161 417 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ACAP2Q15057 778 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ZC3H12AQ5D1E8 599 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms