RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 OXR1Q8N573 874 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 BRI3BPQ8WY22 251 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 WNT8BQ93098 351 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SLC47A1Q96FL8 570 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 EEF2KMTQ96G04 330 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ATXN7L3BQ96GX2 97 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SERAC1Q96JX3 654 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 BBS4Q96RK4 519 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ZNF607Q96SK3 696 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 RBM4BQ9BQ04 359 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 RBM4Q9BWF3 364 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 PDGFDQ9GZP0 370 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 KLHL25Q9H0H3 589 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 OSGEPL1Q9H4B0 414 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ALG13Q9NP73 1137 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 INTS7Q9NVH2 962 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ING3Q9NXR8 418 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 KLF15Q9UIH9 416 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 A0A096LPK6 155 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ZNF487B1APH4 448 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 H0YGN5 161 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ZBTB14O43829 449 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ALPPP05187 535 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TFE3P19532 575 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 MYL9P24844 172 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SERPINA4P29622 427 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 OXTRP30559 389 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TLX1P31314 330 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GRM5P41594 1212 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GK3PQ14409 553 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ACAP2Q15057 778 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 QPRTQ15274 297 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 PARP15Q460N3 678 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GALNTL6Q49A17 601 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 RSBN1Q5VWQ0 802 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 BBS12Q6ZW61 710 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TMEM192Q8IY95 271 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SFRP1Q8N474 314 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SPATA20Q8TB22 786 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 MDM1Q8TC05 714 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 HCAR2Q8TDS4 363 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 EEF1AKMT1Q8WVE0 214 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SLC35C1Q96A29 364 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 B3GALT6Q96L58 329 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TLR10Q9BXR5 811 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 EXOSC4Q9NPD3 245 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ADGRE2Q9UHX3 823 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TPP1O14773 563 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ATMINO43313 823 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 AKAP3O75969 853 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TIMP1P01033 207 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 RARAP10276 462 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GDI1P31150 447 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 HSD17B2P37059 387 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GPR15P49685 360 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 PITPNAQ00169 270 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ALDH6A1Q02252 535 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 PDK3Q15120 406 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 MIIPQ5JXC2 388 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ARMC12Q5T9G4 340 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 FAXCQ5TGI0 409 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 PACS1Q6VY07 963 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ATG16L2Q8NAA4 619 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 HJURPQ8NCD3 748 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 KREMEN2Q8NCW0 462 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TSPAN14Q8NG11 270 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TMEM159Q96B96 161 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 MBOAT7Q96N66 472 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 HDHD2Q9H0R4 259 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 POLR1BQ9H9Y6 1135 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 hCG_1818297A0A087WSY0 165 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ULK1O75385 1050 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SLITRK3O94933 977 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 IGHEP01854 428 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GPIP06744 558 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TNNI3P19429 210 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 AKAP5P24588 427 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 CASP5P51878 434 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SEC24CP53992 1094 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 RPP38P78345 283 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 NDUFAF6Q330K2 333 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ZYG11AQ6WRX3 759 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 SLC39A5Q6ZMH5 540 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 QKIQ96PU8 341 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 LGMNQ99538 433 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 GORASP1Q9BQQ3 440 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ACE2Q9BYF1 805 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ROGDIQ9GZN7 287 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 MRM3Q9HC36 420 aaKnown RBP7.84□□□□□ -1.15
VPS13D-211ENST00000543710 CALML5Q9NZT1 146 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 TSPAN16Q9UKR8 245 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
VPS13D-211ENST00000543710 HS6ST1O60243 411 aa7.83□□□□□ -1.16
VPS13D-211ENST00000543710 PSMD10O75832 226 aa7.83□□□□□ -1.16
VPS13D-211ENST00000543710 CER1O95813 267 aa7.83□□□□□ -1.16
VPS13D-211ENST00000543710 IFNGP01579 166 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms