RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	MAGEH1	Q9H213	219 aa		11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	MRPL46	Q9H2W6	279 aa	Known RBP	11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	COG4	Q9H9E3	785 aa		11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	PDF	Q9HBH1	243 aa		11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	HSFX1	Q9UBD0	423 aa		11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	DNMT3L	Q9UJW3	386 aa		11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.31	□□□□□ -0.6
LDHA-222	ENST00000543695	HIDE1	A8MVS5	230 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	TK2	O00142	265 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	MATN2	O00339	956 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	HDAC3	O15379	428 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	DLX3	O60479	287 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	PSMG1	O95456	288 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ATF6	P18850	670 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	SAT1	P21673	171 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	GLDC	P23378	1020 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ATP5F1	P24539	256 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	MPST	P25325	297 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ADSL	P30566	484 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	OR1E1	P30953	314 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CA8	P35219	290 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ATP5C1	P36542	298 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CPOX	P36551	454 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC26A3	P40879	764 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	TUFM	P49411	452 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	RPL14	P50914	215 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	COPA	P53621	1224 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CDH4	P55283	916 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	MAX	P61244	160 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	MXRA7	P84157	204 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	KDSR	Q06136	332 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	DLG1	Q12959	904 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ZNF235	Q14590	738 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	KPNB1	Q14974	876 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	NAA25	Q14CX7	972 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ACSBG2	Q5FVE4	666 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	TECRL	Q5HYJ1	363 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	SIRPB2	Q5JXA9	342 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC8B1	Q6J4K2	584 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	RNF135	Q8IUD6	432 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	RNF168	Q8IYW5	571 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	LGI2	Q8N0V4	545 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	GPATCH11	Q8N954	259 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	VN1R2	Q8NFZ6	395 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	OR13J1	Q8NGT2	312 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	GPR150	Q8NGU9	434 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	GIPC2	Q8TF65	315 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	SCG3	Q8WXD2	468 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	NXNL1	Q96CM4	212 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CMTM5	Q96DZ9	223 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	FAM122A	Q96E09	287 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	RSRC1	Q96IZ7	334 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	OMD	Q99983	421 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	PHF7	Q9BWX1	381 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ATXN3L	Q9H3M9	355 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CCSER2	Q9H7U1	834 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	TRPC7	Q9HCX4	862 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	CPSF2	Q9P2I0	782 aa	Known RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	XPR1	Q9UBH6	696 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	STOML1	Q9UBI4	398 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	UXT	Q9UBK9	157 aa	Predicted RBP	11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	STK39	Q9UEW8	545 aa		11.3	□□□□□ -0.6
LDHA-222	ENST00000543695	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	LOC730098	B7Z3J9	87 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ENTPD5	O75356	428 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	WISP3	O95389	354 aa	Predicted RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	PIGN	O95427	931 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	RBP1	P09455	135 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	LTA4H	P09960	611 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ACVRL1	P37023	503 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC11A2	P49281	568 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	PFKP	Q01813	784 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	GNA12	Q03113	381 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	USP4	Q13107	963 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	KLF10	Q13118	480 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	KCNC3	Q14003	757 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	RFTN1	Q14699	578 aa	Predicted RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	FAM83E	Q2M2I3	478 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	USP41	Q3LFD5	358 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	KHDC1	Q4VXA5	237 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC9B1	Q4ZJI4	515 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	HECTD2	Q5U5R9	776 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	AGAP9	Q5VTM2	703 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SEL1L3	Q68CR1	1132 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	FAM45BP	Q6NSW5	357 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ANKRD54	Q6NXT1	300 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	KLC3	Q6P597	504 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CNST	Q6PJW8	725 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ACAD11	Q709F0	780 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CHST9	Q7L1S5	443 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	TAS1R1	Q7RTX1	841 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	DDX53	Q86TM3	631 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SETD3	Q86TU7	594 aa	Predicted RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CIR1	Q86X95	450 aa	Predicted RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CILP2	Q8IUL8	1156 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ULK2	Q8IYT8	1036 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	KIRREL3	Q8IZU9	778 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CPSF7	Q8N684	471 aa	Known RBP	11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms