RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 F9P00740 461 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 BRWD1-AS2P59051 145 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 FOXD4Q12950 439 aaPredicted RBP6.06□□□□□ -1.44
YBX3-210ENST00000540975 PAPPA-AS1Q5QFB9 102 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 GORABQ5T7V8 394 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 LCTLQ6UWM7 567 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 TSPYL6Q8N831 410 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 HUS1BQ8NHY5 278 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 RND1Q92730 232 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 KLHL29Q96CT2 875 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 HAUS8Q9BT25 410 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 TKTL2Q9H0I9 626 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 CNGB3Q9NQW8 809 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 C9orf78Q9NZ63 289 aaPredicted RBP6.06□□□□□ -1.44
YBX3-210ENST00000540975 ZNF112Q9UJU3 913 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 NAALADL1Q9UQQ1 740 aa6.06□□□□□ -1.44
YBX3-210ENST00000540975 UTYO14607 1347 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 SCN5AQ14524 2016 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 TULP2O00295 520 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 LDLRAD4O15165 306 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 PLRG1O43660 514 aaKnown RBP6.05□□□□□ -1.44
YBX3-210ENST00000540975 LDB3O75112 727 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 SEC31AO94979 1220 aaKnown RBP6.05□□□□□ -1.44
YBX3-210ENST00000540975 G6PDP11413 515 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 ABCD1P33897 745 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 CPOXP36551 454 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 EIF2S3P41091 472 aaKnown RBP6.05□□□□□ -1.44
YBX3-210ENST00000540975 POU5F1BQ06416 359 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 ILF3Q12906 894 aaKnown RBP eCLIP6.05□□□□□ -1.44
YBX3-210ENST00000540975 WBP2NLQ6ICG8 309 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 SLC46A3Q7Z3Q1 461 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 FOXRED2Q8IWF2 684 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 NFKBIDQ8NI38 313 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 WFIKKN2Q8TEU8 576 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 TANKQ92844 425 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 PABPC5Q96DU9 382 aaKnown RBP6.05□□□□□ -1.44
YBX3-210ENST00000540975 RRP36Q96EU6 259 aaKnown RBP6.05□□□□□ -1.44
YBX3-210ENST00000540975 IL17FQ96PD4 163 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 PKP4Q99569 1192 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 C17orf75Q9HAS0 396 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 BRF2Q9HAW0 419 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 KCNG2Q9UJ96 466 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 ARHGAP26Q9UNA1 814 aa6.05□□□□□ -1.44
YBX3-210ENST00000540975 CLGNO14967 610 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 TNFSF14O43557 240 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 CYC1P08574 325 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 LINC00271P0C7V0 271 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.443e-11■■■□□ 14.6
YBX3-210ENST00000540975 RAD23BP54727 409 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 GSTA3Q16772 222 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 ZNF718Q3SXZ3 478 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 ZNF672Q499Z4 452 aaPredicted RBP6.04□□□□□ -1.44
YBX3-210ENST00000540975 ATP13A5Q4VNC0 1218 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 HIST2H2BCQ6DN03 193 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 HIST2H2BDQ6DRA6 164 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 PLEKHA7Q6IQ23 1121 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 WDR73Q6P4I2 378 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 TAOK1Q7L7X3 1001 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 CUZD1Q86UP6 607 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 SLC41A2Q96JW4 573 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 AGXT2Q9BYV1 514 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 GPR108Q9NPR9 543 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 TINAGQ9UJW2 476 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 ICAM5Q9UMF0 924 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 GTF2A1LQ9UNN4 478 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 TAF1P21675 1872 aa6.04□□□□□ -1.44
YBX3-210ENST00000540975 A0A1B0GVC2 190 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 A6NLC8 198 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 HNRNPCL2B2RXH8 293 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 MID1O15344 667 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 DDIT3P35638 169 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 ARL1P40616 181 aaPredicted RBP6.03□□□□□ -1.44
YBX3-210ENST00000540975 SORDQ00796 357 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 NEXNQ0ZGT2 675 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 EIF2S3LQ2VIR3 472 aaKnown RBP6.03□□□□□ -1.44
YBX3-210ENST00000540975 FAM76BQ5HYJ3 339 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 ACAD10Q6JQN1 1059 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 INO80CQ6PI98 192 aaPredicted RBP6.03□□□□□ -1.44
YBX3-210ENST00000540975 HAPLN4Q86UW8 402 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 SATL1Q86VE3 508 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 EXOC3L1Q86VI1 746 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 ARMC8Q8IUR7 673 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 WDR63Q8IWG1 891 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 CHERPQ8IWX8 916 aaKnown RBP6.03□□□□□ -1.44
YBX3-210ENST00000540975 SPATA6LQ8N4H0 392 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 RFLNBQ8N5W9 214 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 CADM4Q8NFZ8 388 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 SPATA22Q8NHS9 363 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 SORCS1Q8WY21 1168 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 DNASE2BQ8WZ79 361 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 SAAL1Q96ER3 474 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 FAM110AQ9BQ89 295 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 EIF2AK1Q9BQI3 630 aaKnown RBP6.03□□□□□ -1.44
YBX3-210ENST00000540975 SLC25A18Q9H1K4 315 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 NDST4Q9H3R1 872 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 ZNF224Q9NZL3 707 aa6.03□□□□□ -1.44
YBX3-210ENST00000540975 SIX4Q9UIU6 781 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms