RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 C3orf20Q8ND61 904 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 SLC30A5Q8TAD4 765 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 GPBAR1Q8TDU6 330 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 ECHDC3Q96DC8 303 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 SELENOOQ9BVL4 669 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 SLC12A9Q9BXP2 914 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 LRRC19Q9H756 370 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 MRPL40Q9NQ50 206 aaKnown RBP26.9■■□□□ 1.9
CHFR-218ENST00000540963 TUBD1Q9UJT1 453 aa26.9■■□□□ 1.9
CHFR-218ENST00000540963 PES1O00541 588 aaKnown RBP26.89■■□□□ 1.9
CHFR-218ENST00000540963 B4GAT1O43505 415 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 PRAMEF11O60813 436 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 ELFN1P0C7U0 828 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 CHRNB2P17787 502 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 CYP4F2P78329 520 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 TLE1Q04724 770 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 TRA2AQ13595 282 aaKnown RBP eCLIP26.89■■□□□ 1.9
CHFR-218ENST00000540963 CLCA4Q14CN2 919 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 WDR59Q6PJI9 974 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 PHLDB2Q86SQ0 1253 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 TAAR9Q96RI9 348 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 CDH19Q9H159 772 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 WDR26Q9H7D7 661 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 CYP4F12Q9HCS2 524 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 FZD10Q9ULW2 581 aa26.89■■□□□ 1.9
CHFR-218ENST00000540963 FLNCQ14315 2725 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 PRSS38A1L453 326 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 SIGLEC16A6NMB1 481 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 CREB3O43889 395 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 GFPT2O94808 682 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 GPR3P46089 330 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 NSFP46459 744 aaKnown RBP26.88■■□□□ 1.89
CHFR-218ENST00000540963 BORAQ6PGQ7 559 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 SRLQ86TD4 932 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 SFTPA2Q8IWL1 248 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 NKD1Q969G9 470 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 CLSTN2Q9H4D0 955 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 RDH14Q9HBH5 336 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 KCTD5Q9NXV2 234 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 ADAM22Q9P0K1 906 aa26.88■■□□□ 1.89
CHFR-218ENST00000540963 CALB1P05937 261 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 CCNB1P14635 433 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 ZNF143P52747 638 aaPredicted RBP26.87■■□□□ 1.89
CHFR-218ENST00000540963 PEX6Q13608 980 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 PNCKQ6P2M8 343 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 DPPA4Q7L190 304 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 PHF13Q86YI8 300 aaPredicted RBP26.87■■□□□ 1.89
CHFR-218ENST00000540963 CCL4L1Q8NHW4 92 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 ZNF564Q8TBZ8 553 aaPredicted RBP26.87■■□□□ 1.89
CHFR-218ENST00000540963 GSDMCQ9BYG8 508 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 GANQ9H2C0 597 aa26.87■■□□□ 1.89
CHFR-218ENST00000540963 RHPN2P1A8MT19 583 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 NTRK1P04629 796 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 CCL4P13236 92 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 EEF1GP26641 437 aaKnown RBP26.86■■□□□ 1.89
CHFR-218ENST00000540963 SOX5P35711 763 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 NSUN2Q08J23 767 aaKnown RBP eCLIP26.86■■□□□ 1.89
CHFR-218ENST00000540963 SCYL2Q6P3W7 929 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 CCDC112Q8NEF3 446 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 SPOCK2Q92563 424 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 DPYSL5Q9BPU6 564 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 LGR4Q9BXB1 951 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 TRNAU1APQ9NX07 287 aaKnown RBP26.86■■□□□ 1.89
CHFR-218ENST00000540963 DACH1Q9UI36 760 aa26.86■■□□□ 1.89
CHFR-218ENST00000540963 IGHV5-10-1A0A0J9YXX1 117 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 J3KR12 359 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 AGRPO00253 132 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 CCP110O43303 1012 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 PRKCGP05129 697 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 MYCLP1P12525 358 aaPredicted RBP26.85■■□□□ 1.89
CHFR-218ENST00000540963 JAM2P57087 298 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 BCL2L1Q07817 233 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 ILF3Q12906 894 aaKnown RBP eCLIP26.85■■□□□ 1.89
CHFR-218ENST00000540963 SQSTM1Q13501 440 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 ZDHHC1Q8WTX9 485 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 CATSPER2Q96P56 530 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 DDA1Q9BW61 102 aa26.85■■□□□ 1.89
CHFR-218ENST00000540963 SPATS2LQ9NUQ6 558 aaKnown RBP26.85■■□□□ 1.89
CHFR-218ENST00000540963 ANKRD62A6NC57 917 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 ARHGAP42A6NI28 874 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 EIF3CLB5ME19 914 aaKnown RBP26.84■■□□□ 1.89
CHFR-218ENST00000540963 PALMO75781 387 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 FGF1P05230 155 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 FGF3P11487 239 aaPredicted RBP26.84■■□□□ 1.89
CHFR-218ENST00000540963 GM2AP17900 193 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 ALDH4A1P30038 563 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 LIMK2P53671 638 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 OR1D5P58170 312 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 RFTN1Q14699 578 aaPredicted RBP26.84■■□□□ 1.89
CHFR-218ENST00000540963 DPCR1Q3MIW9 517 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 AMZ1Q400G9 498 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 HSP90AA4PQ58FG1 418 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 TCP11X2Q5H9J9 407 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 TSEN2Q8NCE0 465 aaKnown RBP26.84■■□□□ 1.89
CHFR-218ENST00000540963 OR4D9Q8NGE8 314 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 EIF3CQ99613 913 aaKnown RBP26.84■■□□□ 1.89
CHFR-218ENST00000540963 NUDT22Q9BRQ3 303 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 CNPY3Q9BT09 278 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 MOSPD1Q9UJG1 213 aa26.84■■□□□ 1.89
CHFR-218ENST00000540963 CAPN5O15484 640 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms