RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TRPC4APQ8TEL6 797 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 AZIN2Q96A70 460 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM120BQ96EK7 910 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF570Q96NI8 536 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RTP3Q9BQQ7 232 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF358Q9NW07 568 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM216Q9P0N5 145 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CDH22Q9UJ99 828 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RAP2CQ9Y3L5 183 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CLUHO75153 1309 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 C9JVG2 144 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 SNRPB2P08579 225 aaKnown RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC159P0C7I6 412 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 EIF2B2P49770 351 aaKnown RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 GALK1P51570 392 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 RAD23AP54725 363 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 VEPH1Q14D04 833 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 MTX3Q5HYI7 312 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 C6orf52Q5T4I8 152 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 CACHD1Q5VU97 1274 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 FAM171BQ6P995 826 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 RTN4RL1Q86UN2 441 aaPredicted RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 CAMK1DQ8IU85 385 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 ATP6V0D2Q8N8Y2 350 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 ATAD1Q8NBU5 361 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 FBXO30Q8TB52 745 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 GANCQ8TET4 914 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.8
TRAF1-202ENST00000540010 UNC93B1Q9H1C4 597 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 ACTR8Q9H981 624 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 CHRAC1Q9NRG0 131 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 COPG2Q9UBF2 871 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 SLC7A8Q9UHI5 535 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 BTRCQ9Y297 605 aa10.02□□□□□ -0.8
TRAF1-202ENST00000540010 CCDC154A6NI56 674 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 BTN3A1O00481 513 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 ARHGEF9O43307 516 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 CPSF4O95639 269 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 F7P08709 466 aaPredicted RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 GATMP50440 423 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 FAM98BQ52LJ0 330 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 GPR107Q5VW38 600 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 RP9Q8TA86 221 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 DLG3Q92796 817 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 NTAN1Q96AB6 310 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 SCLYQ96I15 445 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 TBL1YQ9BQ87 522 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 EBF3Q9H4W6 596 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 NOL11Q9H8H0 719 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 SLC17A6Q9P2U8 582 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 MAP3K13O43283 966 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 TIPRLO75663 272 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 MT-ND1P03886 318 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 ATP5BP06576 529 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 SERPINF2P08697 491 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 TSHRP16473 764 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 CRHR1P34998 444 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 PBX3P40426 434 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 CCT8P50990 548 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 AAGABQ6PD74 315 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 ADCK2Q7Z695 626 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 PATL1Q86TB9 770 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 IGDCC3Q8IVU1 814 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 UNC5BQ8IZJ1 945 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 TNIP2Q8NFZ5 429 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 VPS45Q9NRW7 570 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 FBXO5Q9UKT4 447 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 SLC27A5Q9Y2P5 690 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 RALGAPA2Q2PPJ7 1873 aa10.02□□□□□ -0.81
TRAF1-202ENST00000540010 URB1O60287 2271 aaKnown RBP10.02□□□□□ -0.81
TRAF1-202ENST00000540010 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 AGRPO00253 132 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 CCNT2O60583 730 aaKnown RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 LRIG2O94898 1065 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FYNP06241 537 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 SLC2A3P11169 496 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 OR1E1P30953 314 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FMO4P31512 558 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 GRIA1P42261 906 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DEFA1P59665 94 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DEFA3P59666 94 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 DLG2Q15700 870 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ARL13AQ5H913 290 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 LHX8Q68G74 356 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 GK5Q6ZS86 529 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 ZDHHC13Q8IUH4 622 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PTGR2Q8N8N7 351 aaPredicted RBP10.01□□□□□ -0.81
TRAF1-202ENST00000540010 C9orf16Q9BUW7 83 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 FBXO44Q9H4M3 255 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 EBF2Q9HAK2 575 aa10.01□□□□□ -0.81
TRAF1-202ENST00000540010 PARVBQ9HBI1 364 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms