RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF641Q96N77 438 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 ADNPQ9H2P0 1102 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 WDR26Q9H7D7 661 aa14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 SPATS2LQ9NUQ6 558 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 NOCTQ9UK39 431 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-206ENST00000538456 TEX15Q9BXT5 2789 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 IGHV5-10-1A0A0J9YXX1 117 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 PRSS38A1L453 326 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 J3KR12 359 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 TEX33O43247 280 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 GFPT2O94808 682 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 FGF3P11487 239 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 RGRP47804 291 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 YBEYP58557 167 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 BIRC2Q13490 618 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 UBAP2LQ14157 1087 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 IGFBP7Q16270 282 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 FAM114A1Q8IWE2 563 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 PELI3Q8N2H9 469 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 ZDHHC1Q8WTX9 485 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 ART4Q93070 314 aa14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 CARS2Q9HA77 564 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-206ENST00000538456 USP9YO00507 2555 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 TNFRSF10CO14798 259 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 HGSO14964 777 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 CYP1A1P04798 512 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 KRT3P12035 628 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 CHRNB2P17787 502 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 GPD1P21695 349 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 MPSTP25325 297 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 SERPINA4P29622 427 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 FMO1Q01740 532 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 CDR2Q01850 454 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 ACOX1Q15067 660 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 LIPIQ6XZB0 460 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 UMODL1-AS1Q8N2C9 162 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 PATE1Q8WXA2 126 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 CELF6Q96J87 481 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 TAAR9Q96RI9 348 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 SELENOOQ9BVL4 669 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 STK33Q9BYT3 514 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 B3GNT4Q9C0J1 378 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 ATP13A3Q9H7F0 1226 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 CATSPERBQ9H7T0 1116 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 PDFQ9HBH1 243 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 B3GALT1Q9Y5Z6 326 aa14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 SPTAN1Q13813 2472 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 UTP20O75691 2785 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-206ENST00000538456 SPENQ96T58 3664 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CCP110O43303 1012 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 ECEL1O95672 775 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 NTRK1P04629 796 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 FGF1P05230 155 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CCNB1P14635 433 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 GM2AP17900 193 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 AK4P27144 223 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CD1CP29017 333 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 UGT1A3P35503 534 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 TRIM23P36406 574 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CCR10P46092 362 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 ILF3Q12906 894 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 PNCKQ6P2M8 343 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 SLC30A9Q6PML9 568 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 SRLQ86TD4 932 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 FAM129CQ86XR2 697 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 ZNF677Q86XU0 584 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 NRROSQ86YC3 692 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CACNA2D3Q8IZS8 1091 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 GPBAR1Q8TDU6 330 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 ZNF71Q9NQZ8 489 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 TAAR2Q9P1P5 351 aa14.03□□□□□ -0.16
SMARCA4-206ENST00000538456 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 FGF10O15520 208 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 PRAMEF11O60813 436 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 PALMO75781 387 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 HOXC4P09017 264 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 PRKAR1AP10644 381 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 MYCLP1P12525 358 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 GP1BBP13224 206 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 CSF2RBP32927 897 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 CSTF2P33240 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 CASRP41180 1078 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 STAT1P42224 750 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 GNPDA1P46926 289 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 TPI1P60174 286 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 FOXK1P85037 733 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 PTP4A2Q12974 167 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 DENND2CQ68D51 928 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 WDR59Q6PJI9 974 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms