RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 TDRD1Q9BXT4 1180 aaKnown RBP17.51■□□□□ 0.39
SNX17-210ENST00000537606 COG4Q9H9E3 785 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 STOML2Q9UJZ1 356 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 CLEC4EQ9ULY5 219 aa17.51■□□□□ 0.39
SNX17-210ENST00000537606 SPECC1L-ADORA2AF8WAN1 911 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 LRG1P02750 347 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 LINC00271P0C7V0 271 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 ABL2P42684 1182 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 POLD2P49005 469 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 CLCN5P51795 746 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 PEX6Q13608 980 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 SLC9B1Q4ZJI4 515 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 ARL13AQ5H913 290 aaPredicted RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 GLT6D1Q7Z4J2 308 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 NECAB2Q7Z6G3 386 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 EFHBQ8N7U6 833 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 TDRD5Q8NAT2 981 aaKnown RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 OR4K2Q8NGD2 314 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 OR6K2Q8NGY2 324 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 DDI1Q8WTU0 396 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 CDKN2AIPNLQ96HQ2 116 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 RETREG1Q9H6L5 497 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 CYP4F12Q9HCS2 524 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNX17-210ENST00000537606 CFAP97Q9P2B7 532 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 RPP40O75818 363 aaKnown RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 ZMPSTE24O75844 475 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 C8AP07357 584 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 MYL4P12829 197 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 NCF2P19878 526 aaPredicted RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 RFTN1Q14699 578 aaPredicted RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 GPR158Q5T848 1215 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 BBS7Q8IWZ6 715 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 GABPB2Q8TAK5 448 aaPredicted RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 MRPS31Q92665 395 aaKnown RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 FAM161BQ96MY7 647 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 TM6SF2Q9BZW4 377 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 CDH19Q9H159 772 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 MRPL46Q9H2W6 279 aaKnown RBP17.5■□□□□ 0.39
SNX17-210ENST00000537606 BPIFA1Q9NP55 256 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 MCM8Q9UJA3 840 aa17.5■□□□□ 0.39
SNX17-210ENST00000537606 A0A087X1B8 175 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 E9PBE3 544 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 KLHL41O60662 606 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 KRT36O76013 467 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 LUC7L3O95232 432 aaKnown RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 PIGNO95427 931 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CD1EP15812 388 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 PLK1P53350 603 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 MXRA7P84157 204 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 ACVR1Q04771 509 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 TRAF2Q12933 501 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CFAP157Q5JU67 520 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 ZNF549Q6P9A3 640 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 Q6ZNB5 142 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 RPS27LQ71UM5 84 aaKnown RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 PHTF2Q8N3S3 785 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 RDH11Q8TC12 318 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CORO1BQ9BR76 489 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 THTPAQ9BU02 230 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 HCFC1R1Q9NWW0 138 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 VPS51Q9UID3 782 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 MID2Q9UJV3 735 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 PTPRSQ13332 1948 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 GOLGA8QA0A0J9YX86 632 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 GOLGA8OA6NCC3 632 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 TMEM114B3SHH9 223 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 GOLGA8NF8WBI6 632 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CCL16O15467 120 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 EFCAB14O75071 495 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 OLFM2O95897 454 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 GNAZP19086 355 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 KCNA5P22460 613 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CDKN1CP49918 316 aaPredicted RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 SESN3P58005 492 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 ERVFC1P60507 584 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 TMPRSS6Q8IU80 811 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 MFN1Q8IWA4 741 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 HJURPQ8NCD3 748 aaPredicted RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 IL23AQ9NPF7 189 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 CATSPERZQ9NTU4 200 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 DNAJC28Q9NX36 388 aa17.49■□□□□ 0.39
SNX17-210ENST00000537606 PRRC2BQ5JSZ5 2229 aaKnown RBP17.49■□□□□ 0.39
SNX17-210ENST00000537606 KIAA1671Q9BY89 1806 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 HIDE1A8MVS5 230 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 PMLP29590 882 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 RHOAP61586 193 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 SLC25A3Q00325 362 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 FAM83EQ2M2I3 478 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 TMC8Q8IU68 726 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 KREMEN2Q8NCW0 462 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ARMC5Q96C12 935 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 OR52B2Q96RD2 323 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 MRPL57Q9BQC6 102 aaKnown RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 SIKE1Q9BRV8 207 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 OSBPL1AQ9BXW6 950 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms