RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 POU6F1Q14863 301 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 TMEM52BQ4KMG9 183 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 AGGF1Q8N302 714 aaeCLIP24.3■■□□□ 1.482e-19■□□□□ 9.9
HMGA2-208ENST00000537429 EIF1ADQ8N9N8 165 aaKnown RBP24.3■■□□□ 1.48
HMGA2-208ENST00000537429 FOXP3Q9BZS1 431 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 BTBD1Q9H0C5 482 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 SGK2Q9HBY8 427 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 FBXO4Q9UKT5 387 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 NEMP1O14524 444 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 AURKAO14965 403 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 TSPAN6O43657 245 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 TNFRSF8P28908 595 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 OXTRP30559 389 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 MAP7D1Q3KQU3 841 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 MSS51Q4VC12 460 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 DENND2CQ68D51 928 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 LYSMD3Q7Z3D4 306 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 GPR161Q8N6U8 529 aaKnown RBP24.29■■□□□ 1.48
HMGA2-208ENST00000537429 RLN3Q8WXF3 142 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 EID2BQ96D98 161 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 SIGLEC10Q96LC7 697 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 RANBP9Q96S59 729 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 ZFYVE1Q9HBF4 777 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 WSB2Q9NYS7 404 aaPredicted RBP24.29■■□□□ 1.48
HMGA2-208ENST00000537429 NFU1Q9UMS0 254 aa24.29■■□□□ 1.48
HMGA2-208ENST00000537429 MYLKQ15746 1914 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 IGHV1OR15-9A0A0B4J2B8 117 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 C1orf232A0A0U1RR37 186 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 SDR42E2A6NKP2 422 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 E7ESA3 106 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 H0Y858 1186 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 CLDN7O95471 211 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 ZNF30P17039 623 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 CRADDP78560 199 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 PTSQ03393 145 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 NAA30Q147X3 362 aaPredicted RBP24.28■■□□□ 1.48
HMGA2-208ENST00000537429 TAF1AQ15573 450 aaPredicted RBP24.28■■□□□ 1.48
HMGA2-208ENST00000537429 CNGA3Q16281 694 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 LRRC66Q68CR7 880 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 LIPIQ6XZB0 460 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 GLT6D1Q7Z4J2 308 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 TMC3Q7Z5M5 1100 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 CBARPQ8N350 705 aaPredicted RBP24.28■■□□□ 1.48
HMGA2-208ENST00000537429 MPP5Q8N3R9 675 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 TTC30BQ8N4P2 665 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 PREBQ9HCU5 417 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 SYBUQ9NX95 663 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.28■■□□□ 1.48
HMGA2-208ENST00000537429 KMT2EQ8IZD2 1858 aa24.28■■□□□ 1.48
HMGA2-208ENST00000537429 FAM47DPA6NHR8 397 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 LDB2O43679 373 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 CRTAMO95727 393 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 ADRA1DP25100 572 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 CD6P30203 668 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 FNTBP49356 437 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 DHX9Q08211 1270 aaKnown RBP24.27■■□□□ 1.48
HMGA2-208ENST00000537429 ARHGEF7Q14155 803 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 USP39Q53GS9 565 aaKnown RBP24.27■■□□□ 1.48
HMGA2-208ENST00000537429 PCID2Q5JVF3 399 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 WDR93Q6P2C0 686 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 NEK5Q6P3R8 708 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 FRMD1Q8N878 549 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 TOE1Q96GM8 510 aaKnown RBP24.27■■□□□ 1.48
HMGA2-208ENST00000537429 FMO2Q99518 471 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 WRAP53Q9BUR4 548 aaKnown RBP24.27■■□□□ 1.48
HMGA2-208ENST00000537429 GPR63Q9BZJ6 419 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 PHACTR1Q9C0D0 580 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 MTRF1LQ9UGC7 380 aaKnown RBP24.27■■□□□ 1.48
HMGA2-208ENST00000537429 INVSQ9Y283 1065 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 ARL5AQ9Y689 179 aa24.27■■□□□ 1.48
HMGA2-208ENST00000537429 MROH6A6NGR9 719 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 PCDH8O95206 1070 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 HMGCLP35914 325 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 LIG3P49916 1009 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 BBS9Q3SYG4 887 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 CCDC38Q502W7 563 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 DNAJC21Q5F1R6 531 aaKnown RBP24.26■■□□□ 1.47
HMGA2-208ENST00000537429 ARMC3Q5W041 872 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 CENPUQ71F23 418 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 WDR5BQ86VZ2 330 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 OR2T34Q8NGX1 318 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 LRRC39Q96DD0 335 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 EML5Q05BV3 1969 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 NUMA1Q14980 2115 aa24.26■■□□□ 1.47
HMGA2-208ENST00000537429 HEATR9A2RTY3 570 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 PRR23AA6NEV1 266 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 C2orf81A6NN90 581 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 C10orf142B7Z368 130 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 PSMD11O00231 422 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 EIF3HO15372 352 aaKnown RBP eCLIP24.25■■□□□ 1.47
HMGA2-208ENST00000537429 BANF1O75531 89 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 ELFN1P0C7U0 828 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 STC1P52823 247 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 VSNL1P62760 191 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 PDIA2Q13087 525 aaKnown RBP24.25■■□□□ 1.47
HMGA2-208ENST00000537429 CCNI2Q6ZMN8 369 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-208ENST00000537429 FAM160A2Q8N612 972 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-208ENST00000537429 CXorf40AQ8TE69 158 aa24.25■■□□□ 1.47
HMGA2-208ENST00000537429 PTCD2Q8WV60 388 aaKnown RBP24.25■■□□□ 1.47
HMGA2-208ENST00000537429 SPACA7Q96KW9 195 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms