RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 HAO1Q9UJM8 370 aa22.76■■□□□ 1.23
HMGA2-206ENST00000536545 MT-CO1P00395 513 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 CDKN2DP55273 166 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 LMAN2Q12907 356 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 TTC31Q49AM3 519 aaPredicted RBP22.75■■□□□ 1.23
HMGA2-206ENST00000536545 CYB5D1Q6P9G0 228 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 AFTPHQ6ULP2 937 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 SPATA6LQ8N4H0 392 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 OR4L1Q8NH43 312 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 TTC8Q8TAM2 541 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 PNPOQ9NVS9 261 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 CLEC4EQ9ULY5 219 aa22.75■■□□□ 1.23
HMGA2-206ENST00000536545 FZD6O60353 706 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 MOSPD3O75425 235 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 STC1P52823 247 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 AP1S1P61966 158 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 ELF3P78545 371 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-206ENST00000536545 KRT72Q14CN4 511 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 ATXN7L2Q5T6C5 722 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-206ENST00000536545 FAM45BPQ6NSW5 357 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 RTL10Q7L3V2 364 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 FAM45AQ8TCE6 357 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 INPP5DQ92835 1189 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 SLC7A6OSQ96CW6 309 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-206ENST00000536545 TCEAL4Q96EI5 215 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 PTCD3Q96EY7 689 aaKnown RBP22.74■■□□□ 1.23
HMGA2-206ENST00000536545 TMEM237Q96Q45 408 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 MRPL57Q9BQC6 102 aaKnown RBP22.74■■□□□ 1.23
HMGA2-206ENST00000536545 EBF4Q9BQW3 602 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 VWA7Q9Y334 891 aa22.74■■□□□ 1.23
HMGA2-206ENST00000536545 LINC01553A4QN01 128 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 ANKRD66B4E2M5 251 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 K7ERQ8 282 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 FGF19O95750 216 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 HOXB8P17481 243 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 FDXRP22570 491 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 DDX6P26196 483 aaKnown RBP eCLIP22.73■■□□□ 1.238e-8■■□□□ 14
HMGA2-206ENST00000536545 TUBB3Q13509 450 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 TECRLQ5HYJ1 363 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 GPR158Q5T848 1215 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 RETSATQ6NUM9 610 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 ZNF549Q6P9A3 640 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 TTC30BQ8N4P2 665 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 OR4K2Q8NGD2 314 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 FIBINQ8TAL6 211 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 RIN3Q8TB24 985 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 SH3RF2Q8TEC5 729 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 ACDQ96AP0 544 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 LMLNQ96KR4 655 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 UBXN10Q96LJ8 280 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 C17orf80Q9BSJ5 609 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 FAM96AQ9H5X1 160 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 MAN1C1Q9NR34 630 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 DNAJC28Q9NX36 388 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 PLK2Q9NYY3 685 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 LNPEPQ9UIQ6 1025 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 CCL26Q9Y258 94 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 C2orf81A6NN90 581 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 TRAFD1O14545 582 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 ZNF195O14628 629 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 DLX3O60479 287 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 HNRNPCL1O60812 293 aaKnown RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 RFPL2O75678 378 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 HSPA4LO95757 839 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 LTA4HP09960 611 aaKnown RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 UBE3AQ05086 875 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 CSHL1Q14406 222 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 TPGS1Q6ZTW0 290 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 SPNS2Q8IVW8 549 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 SCG3Q8WXD2 468 aaKnown RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 GPAMQ9HCL2 828 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 ARL8BQ9NVJ2 186 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 POLR3BQ9NW08 1133 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 KIAA1522Q9P206 1035 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-206ENST00000536545 RWDD3Q9Y3V2 267 aa22.73■■□□□ 1.23
HMGA2-206ENST00000536545 DOCK6Q96HP0 2047 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 KRT16P08779 473 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 LPOP22079 712 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-206ENST00000536545 CD70P32970 193 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 SLC26A3P40879 764 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 GRIA4P48058 902 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 SUOXP51687 545 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 RCN2Q14257 317 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 FAM83EQ2M2I3 478 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 PLEKHG6Q3KR16 790 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 AGAP9Q5VTM2 703 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 SPRED2Q7Z698 418 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 PIM3Q86V86 326 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 C7orf61Q8IZ16 206 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 CMTM8Q8IZV2 173 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 ZNF781Q8N8C0 355 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 UNKQ9C0B0 810 aaKnown RBP22.72■■□□□ 1.23
HMGA2-206ENST00000536545 DRC3Q9H069 523 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 INTS10Q9NVR2 710 aaKnown RBP22.72■■□□□ 1.23
HMGA2-206ENST00000536545 CRYL1Q9Y2S2 319 aa22.72■■□□□ 1.23
HMGA2-206ENST00000536545 SMAD6O43541 496 aaKnown RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 PRSS56P0CW18 603 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 SLC8A1P32418 973 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 PLK1P53350 603 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 TIAL1Q01085 375 aaKnown RBP eCLIP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms