RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MFSD7Q6UXD7 560 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 EFL1Q7Z2Z2 1120 aaKnown RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 TMPRSS9Q7Z410 1059 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 KDELC2Q7Z4H8 507 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 ATPAF2Q8N5M1 289 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 KYQ8NBH2 561 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 PATE1Q8WXA2 126 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 MAML1Q92585 1016 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 SCAMP4Q969E2 229 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 TUBGCP5Q96RT8 1024 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 WDR24Q96S15 920 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM168Q9H0V1 697 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 CCDC86Q9H6F5 360 aaKnown RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 RBM22Q9NW64 420 aaKnown RBP eCLIP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 APOBEC3BQ9UH17 382 aaKnown RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 TTLL3Q9Y4R7 772 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 CFAP46Q8IYW2 2715 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 SSU72P8A0A1W2PR75 194 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 LRRD1A4D1F6 860 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 SOWAHDA6NJG2 315 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 EIF3CLB5ME19 914 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 HEXIM1O94992 359 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 PGLSO95336 258 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 MT-CO3P00414 261 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 CPP00450 1065 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 JCHAINP01591 159 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 PIRTP0C851 137 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 COMTP21964 271 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 CA5AP35218 305 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 EIF2S3P41091 472 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 THOP1P52888 689 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 SRP54P61011 504 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 DAB2P98082 770 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 PTSQ03393 145 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 ITKQ08881 620 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 CCDC15Q0P6D6 951 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 NFATC4Q14934 902 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 KCTD19Q17RG1 926 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 COL28A1Q2UY09 1125 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF648Q5T619 568 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 MARC1Q5VT66 337 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 RAD9BQ6WBX8 426 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 MACC1Q6ZN28 852 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 B3GNT8Q7Z7M8 397 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 NRROSQ86YC3 692 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 OXR1Q8N573 874 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 LZTR1Q8N653 840 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 DENND6BQ8NEG7 585 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 CTNNBL1Q8WYA6 563 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 KRT35Q92764 455 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF599Q96NL3 588 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 EIF3CQ99613 913 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 BOCQ9BWV1 1114 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 ARFGAP3Q9NP61 516 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 NLGN3Q9NZ94 848 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 GULP1Q9UBP9 304 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM98Q9Y2Y6 226 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 PCDHGA1Q9Y5H4 931 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 HEY1Q9Y5J3 304 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 UNC13CQ8NB66 2214 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 BOD1L1Q8NFC6 3051 aa9.65□□□□□ -0.86
SSBP3-215ENST00000533946 CACNA1GO43497 2377 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 AKR1B15C9JRZ8 316 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 MATN3O15232 486 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 YKT6O15498 198 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CBFA2T2O43439 604 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 BRINP1O60477 761 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 MAGEC1O60732 1142 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 MTA2O94776 668 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CLDN7O95471 211 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 EML2O95834 649 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 MPOP05164 745 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CEACAM5P06731 702 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ELFN1P0C7U0 828 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 AK4P27144 223 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 VIPR1P32241 457 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ZNF75DP51815 510 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 HK3P52790 923 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 AP1S1P61966 158 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 HNRNPKP61978 463 aaKnown RBP eCLIP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 SKOR1P84550 965 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 PPARDQ03181 441 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ELP6Q0PNE2 266 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 GALNT3Q14435 633 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 RFTN1Q14699 578 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 AGERQ15109 404 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CFAP58Q5T655 872 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ERAP2Q6P179 960 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 PNCKQ6P2M8 343 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms