RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ITM2BQ9Y287 266 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 TRAF6Q9Y4K3 522 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 RAD54BQ9Y620 910 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 STRNO43815 780 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SERPINB7O75635 380 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 SIX3O95343 332 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 CLIC3O95833 236 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 GNAO1P09471 354 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 TMED10P49755 219 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 RHDQ02161 417 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 TECRLQ5HYJ1 363 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 HMBOX1Q6NT76 420 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 FAM47BQ8NA70 645 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 C2CD4AQ8NCU7 369 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 DPF3Q92784 378 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 PABPC5Q96DU9 382 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 MAELQ96JY0 434 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
CAPN1-226ENST00000533820 ABHD16BQ9H3Z7 469 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 EPB41L1Q9H4G0 881 aa19.4■□□□□ 0.7
CAPN1-226ENST00000533820 AIF1P55008 147 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 TIGD5Q53EQ6 642 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
CAPN1-226ENST00000533820 PM20D1Q6GTS8 502 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 CHERPQ8IWX8 916 aaKnown RBP19.39■□□□□ 0.69
CAPN1-226ENST00000533820 CASP10Q92851 521 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 SMARCD1Q96GM5 515 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 RNF181Q9P0P0 153 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 RABL2BQ9UNT1 228 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 SLC22A2O15244 555 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 NRP2O60462 931 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 POMCP01189 267 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 CDH2P19022 906 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-226ENST00000533820 ADSLP30566 484 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-226ENST00000533820 APOFQ13790 326 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 RFTN1Q14699 578 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-226ENST00000533820 FCRL5Q96RD9 977 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 NDEL1Q9GZM8 345 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 V9GYQ6 96 aa19.39■□□□□ 0.69
CAPN1-226ENST00000533820 SOCS2O14508 198 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 TRMUO75648 421 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SRP72O76094 671 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 PIRTP0C851 137 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 PAMP19021 973 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 BRCA1P38398 1863 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 VPS26BQ4G0F5 336 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 AGAP9Q5VTM2 703 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SDHAF4Q5VUM1 108 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 OSBPL10Q9BXB5 764 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CEPT1Q9Y6K0 416 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 ARHGAP10A1A4S6 786 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 GJB3O75712 270 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 B3GAT3O94766 335 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 MT-ND1P03886 318 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 LTA4HP09960 611 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 HSPA13P48723 471 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 ARSDP51689 593 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 NDST2P52849 883 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 GEMP55040 296 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CDKN2DP55273 166 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SQLEQ14534 574 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 PATL1Q86TB9 770 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 DHFR2Q86XF0 187 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SPPL2CQ8IUH8 684 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 NUP93Q8N1F7 819 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 KCNA7Q96RP8 456 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 MARCH4Q9P2E8 410 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 F8W810 466 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 FOXD2O60548 495 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 F2P00734 622 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 ATP6V1B2P21281 511 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CCNCP24863 283 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CD86P42081 329 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 HK2P52789 917 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 POU4F1Q01851 419 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 RAB41Q5JT25 222 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 C6orf10Q5SRN2 563 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CHSY3Q70JA7 882 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 RETREG3Q86VR2 466 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 CNTN4Q8IWV2 1026 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 DDIASQ8IXT1 998 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SLC2A11Q9BYW1 496 aa19.38■□□□□ 0.69
CAPN1-226ENST00000533820 SUCOQ9UBS9 1254 aaKnown RBP19.38■□□□□ 0.69
CAPN1-226ENST00000533820 TSC2P49815 1807 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 MYLKQ15746 1914 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 A0A087X1B8 175 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 THP07101 528 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 LHX1P48742 406 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 RELAQ04206 551 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 HECTD2Q5U5R9 776 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 POTEHQ6S545 545 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 TMEM207Q6UWW9 146 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 LPCAT2Q7L5N7 544 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 GIPC3Q8TF64 312 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 HDAC10Q969S8 669 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 PIF1Q9H611 641 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 ARMC7Q9H6L4 198 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms