RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SCNN1GP51170 649 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RPL7AP62424 266 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PDCD4Q53EL6 469 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 FNDC3BQ53EP0 1204 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RAP1GAP2Q684P5 730 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ERICH5Q6P6B1 374 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 LCLAT1Q6UWP7 414 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TDRPQ86YL5 185 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TRAPPC5Q8IUR0 188 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PM20D2Q8IYS1 436 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 KIAA0319LQ8IZA0 1049 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF540Q8NDQ6 660 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 UBASH3BQ8TF42 649 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PHF10Q8WUB8 498 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ALG3Q92685 438 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ZHX1-C8orf76Q96EF9 292 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 REXO5Q96IC2 774 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SENP6Q9GZR1 1112 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 MRPL17Q9NRX2 175 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 LGALS13Q9UHV8 139 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SAMD4AQ9UPU9 718 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 GPC6Q9Y625 555 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SQORQ9Y6N5 450 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SLC22A3O75751 556 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF24P17028 368 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 FGFR3P22607 806 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CDK9P50750 372 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RPL38P63173 70 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SLC9A5Q14940 896 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 FAM220AQ7Z4H9 259 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ARMC8Q8IUR7 673 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 C10orf107Q8IVU9 208 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 DNAJB14Q8TBM8 379 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PTPRHQ9HD43 1115 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SLC12A4Q9UP95 1085 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CHKBQ9Y259 395 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PCDHB1Q9Y5F3 818 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 A0A0U1RQJ8 604 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 C1QTNF3-AMACRE9PGA6 284 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 NRP2O60462 931 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 UGT2B11O75310 529 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RGS20O76081 388 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 GNRH1P01148 92 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ASGR1P07306 291 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SMIM10L2AP0DMW4 78 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SMIM10L2BP0DMW5 78 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 VEGFAP15692 232 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 HADHBP55084 474 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CRADDP78560 199 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 FUT2Q10981 343 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ITGA7Q13683 1181 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 DGCR6Q14129 220 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 NR1D2Q14995 579 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 GCNT7Q6ZNI0 430 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ARHGAP36Q6ZRI8 547 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 NCCRP1Q6ZVX7 275 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 KRT77Q7Z794 578 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PEG10Q86TG7 708 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TMEM139Q8IV31 216 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CNTD1Q8N815 330 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TOR1AIP2Q8NFQ8 470 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 OR5B17Q8NGF7 314 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CXorf40AQ8TE69 158 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ZFAND2BQ8WV99 257 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 BORCS5Q969J3 196 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PPP1R14AQ96A00 147 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ELMO3Q96BJ8 720 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF607Q96SK3 696 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RAPGEFL1Q9UHV5 662 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RAB26Q9ULW5 256 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 USP20Q9Y2K6 914 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 POLR1DQ9Y2S0 133 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TRAF6Q9Y4K3 522 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 KCNE2Q9Y6J6 123 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 A0A1W2PQ67 120 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 MGRN1O60291 552 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 SHOX2O60902 331 aaPredicted RBP7.02□□□□□ -1.28
CTNND1-236ENST00000533667 TM7SF2O76062 418 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 UMPSP11172 480 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 OGNP20774 298 aaKnown RBP7.02□□□□□ -1.28
CTNND1-236ENST00000533667 CDH3P22223 829 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 RCVRNP35243 200 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 GSSP48637 474 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 ATP12AP54707 1039 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 RAB25P57735 213 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 HSPA14Q0VDF9 509 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 RFTN2Q52LD8 501 aaPredicted RBP7.02□□□□□ -1.28
CTNND1-236ENST00000533667 TATDN1Q6P1N9 297 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 MON1AQ86VX9 555 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 SLC4A11Q8NBS3 891 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 EEF1AKMT1Q8WVE0 214 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 P2RY11Q96G91 374 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 SMAD5Q99717 465 aaKnown RBP7.02□□□□□ -1.28
CTNND1-236ENST00000533667 OXCT2Q9BYC2 517 aaPredicted RBP7.02□□□□□ -1.28
CTNND1-236ENST00000533667 ZDHHC6Q9H6R6 413 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 GLOD4Q9HC38 313 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 PNPLA8Q9NP80 782 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms