RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 BLKP51451 505 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 DAB2P98082 770 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 SEMG2Q02383 582 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 NFATC4Q14934 902 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 SLC9A4Q6AI14 798 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 DHRS13Q6UX07 377 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 PHACTR4Q8IZ21 702 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 NDUFAF2Q8N183 169 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 FAM181AQ8N9Y4 354 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 SLC13A1Q9BZW2 595 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 RBM22Q9NW64 420 aaKnown RBP eCLIP16.71■□□□□ 0.27
PKP3-209ENST00000533069 NCKIPSDQ9NZQ3 722 aa16.71■□□□□ 0.27
PKP3-209ENST00000533069 APOBEC3BQ9UH17 382 aaKnown RBP16.71■□□□□ 0.27
PKP3-209ENST00000533069 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 K7ESM1 405 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 TPP1O14773 563 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 APOL1O14791 398 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 PSTPIP1O43586 416 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 PCCBP05166 539 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 GIMD1P0DJR0 217 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 CKMT1AP12532 417 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 CCNB1P14635 433 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 COMTP21964 271 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 HNF1BP35680 557 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 NOP2P46087 812 aaKnown RBP16.7■□□□□ 0.26
PKP3-209ENST00000533069 DUSP3P51452 185 aaPredicted RBP16.7■□□□□ 0.26
PKP3-209ENST00000533069 PPARDQ03181 441 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 PPIDQ08752 370 aaKnown RBP16.7■□□□□ 0.26
PKP3-209ENST00000533069 ITKQ08881 620 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 INPP5AQ14642 412 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 C11orf63Q6NUN7 778 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 ZCCHC8Q6NZY4 707 aaKnown RBP16.7■□□□□ 0.26
PKP3-209ENST00000533069 USP45Q70EL2 814 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 PLD5Q8N7P1 536 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 TPCN2Q8NHX9 752 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 SCRN2Q96FV2 425 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 MCCC1Q96RQ3 725 aaPredicted RBP16.7■□□□□ 0.26
PKP3-209ENST00000533069 KLF15Q9UIH9 416 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 RAI2Q9Y5P3 530 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 TRPM6Q9BX84 2022 aa16.7■□□□□ 0.26
PKP3-209ENST00000533069 AKAP13Q12802 2813 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 MACROD2A1Z1Q3 448 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 RCCD1A6NED2 376 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 PSMD11O00231 422 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 FZD6O60353 706 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
PKP3-209ENST00000533069 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 SLC10A2Q12908 348 aaPredicted RBP16.69■□□□□ 0.26
PKP3-209ENST00000533069 ACOX1Q15067 660 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 PDK1Q15118 436 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 CNGA3Q16281 694 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 FAXCQ5TGI0 409 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 ESRP1Q6NXG1 681 aaKnown RBP16.69■□□□□ 0.26
PKP3-209ENST00000533069 FSTL5Q8N475 847 aaPredicted RBP16.69■□□□□ 0.26
PKP3-209ENST00000533069 LMX1AQ8TE12 382 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 ZCCHC14Q8WYQ9 949 aaKnown RBP16.69■□□□□ 0.26
PKP3-209ENST00000533069 APOLD1Q96LR9 279 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 COQ10AQ96MF6 247 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 IL12RB2Q99665 862 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 APOOQ9BUR5 198 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 SALL4Q9UJQ4 1053 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 PPIL1Q9Y3C6 166 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 TTLL3Q9Y4R7 772 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 OR1A2Q9Y585 309 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 HEY1Q9Y5J3 304 aa16.69■□□□□ 0.26
PKP3-209ENST00000533069 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 LMO7DNF2Z398 122 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 CACNB4O00305 520 aaPredicted RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 PPP1R12AO14974 1030 aaPredicted RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 RASGRP1O95267 797 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 HLA-DQB2P05538 268 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 GP1BAP07359 652 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 HOXC4P09017 264 aaPredicted RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 GM2AP17900 193 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 KELP23276 732 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 RPL26P61254 145 aaKnown RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 IFI35P80217 286 aaPredicted RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 E2F1Q01094 437 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 ARHGEF7Q14155 803 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 PRRT3Q5FWE3 981 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 NYAP1Q6ZVC0 841 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 BZW1Q7L1Q6 419 aaKnown RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 RFX6Q8HWS3 928 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 RBFAQ8N0V3 343 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 PIH1D2Q8WWB5 315 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 RNF25Q96BH1 459 aaPredicted RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 NUS1Q96E22 293 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 WDR92Q96MX6 357 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 LRRC61Q9BV99 259 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 DNPEPQ9ULA0 475 aa16.68■□□□□ 0.26
PKP3-209ENST00000533069 RPL26L1Q9UNX3 145 aaKnown RBP16.68■□□□□ 0.26
PKP3-209ENST00000533069 NPIPB15A6NHN6 443 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms