RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 HLA-CQ95604 372 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 ERP27Q96DN0 273 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 TBATAQ96M53 351 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 EBNA1BP2Q99848 306 aaKnown RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 SUV39H2Q9H5I1 410 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 STX18Q9P2W9 335 aaKnown RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 ARIH1Q9Y4X5 557 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 AKAP10O43572 662 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 CDH3P22223 829 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 TLX1P31314 330 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 SKIV2L2P42285 1042 aaKnown RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 SKOR1P84550 965 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 RGS1Q08116 209 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 NAB1Q13506 487 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 HNRNPDQ14103 355 aaKnown RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 SHHQ15465 462 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 TMEM220Q6QAJ8 160 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 ZCCHC23Q6ZST2 131 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 NUS1Q96E22 293 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 OSBPL6Q9BZF3 934 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 OR2AG1Q9H205 316 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 NEUROG2Q9H2A3 272 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 CARS2Q9HA77 564 aaKnown RBP7.98□□□□□ -1.13
CTNND1-230ENST00000532245 SPHK2Q9NRA0 654 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 CHRAC1Q9NRG0 131 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 OGDHLQ9ULD0 1010 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 USH1CQ9Y6N9 552 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 PIAS3Q9Y6X2 628 aa7.98□□□□□ -1.13
CTNND1-230ENST00000532245 ILVBLA1L0T0 632 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 B4DGG1 531 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TRIM13O60858 407 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CXCR3P49682 368 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 AQP5P55064 265 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 MRPL10Q7Z7H8 261 aaKnown RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 PCDH19Q8TAB3 1148 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TCP10LQ8TDR4 215 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CMTM5Q96DZ9 223 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ING2Q9H160 280 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 EXO5Q9H790 373 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 PHTF1Q9UMS5 762 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ENTPD4Q9Y227 616 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 USP15Q9Y4E8 981 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 COLEC10Q9Y6Z7 277 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 PRMT5O14744 637 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 BEST1O76090 585 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 WDR47O94967 919 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TSPAN8P19075 237 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TFE3P19532 575 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ALDH4A1P30038 563 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ACTR1BP42025 376 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CAPZA2P47755 286 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ACTR1AP61163 376 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CACNG1Q06432 222 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 INPP5AQ14642 412 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 PON2Q15165 354 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 MS4A13Q5J8X5 152 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 UBXN11Q5T124 520 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 FAM9CQ8IZT9 166 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 SLC39A11Q8N1S5 342 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 GPR156Q8NFN8 814 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 KCTD4Q8WVF5 259 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 WDR26Q9H7D7 661 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ACTR5Q9H9F9 607 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ANLNQ9NQW6 1124 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 POLG2Q9UHN1 485 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 FAM155AB1AL88 458 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ZBTB22O15209 634 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ALPIP09923 528 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 INCA1Q0VD86 236 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 RAB33AQ14088 237 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TMC3Q7Z5M5 1100 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 NR1H4Q96RI1 486 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 PIF1Q9H611 641 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 YY1AP1Q9H869 796 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 HCFC1R1Q9NWW0 138 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 FKBPLQ9UIM3 349 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 SLC12A4Q9UP95 1085 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TCRBV7S2A1N4TA0A589 114 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 IQCF5A8MTL0 148 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 J3KR12 359 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 KRT16P08779 473 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ITPKAP23677 461 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 GRK2P25098 689 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 SLC1A6P48664 564 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 NUDT2P50583 147 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ALDH6A1Q02252 535 aaKnown RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 NFYCQ13952 458 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 FAM182AQ5T1J6 154 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 C16orf89Q6UX73 402 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TAS1R1Q7RTX1 841 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 SYT12Q8IV01 421 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TDHQ8IZJ6 230 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 TTC9BQ8N6N2 239 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 UBE2E3Q969T4 207 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CDCA3Q99618 268 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 CHCHD3Q9NX63 227 aaKnown RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms