RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 IGSF5Q9NSI5 407 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ARL8BQ9NVJ2 186 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 PNPOQ9NVS9 261 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CPSF2Q9P2I0 782 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 XPR1Q9UBH6 696 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ZMYM5Q9UJ78 669 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 TRIM33Q9UPN9 1127 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 COMMD10Q9Y6G5 202 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 E2F8A0AVK6 867 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ZBBXA8MT70 800 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 SPECC1L-ADORA2AF8WAN1 911 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 H7C0S8 307 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF195O14628 629 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 HDAC3O15379 428 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 GYG2O15488 501 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 DLX3O60479 287 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 WISP3O95389 354 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 CD160O95971 181 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 PRLP01236 227 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 CKMP06732 381 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 C8AP07357 584 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 FDXRP22570 491 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 GLDCP23378 1020 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 PRDX6P30041 224 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ADSLP30566 484 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 CA8P35219 290 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 STC1P52823 247 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 RHOAP61586 193 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 PFKPQ01813 784 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 AARS2Q5JTZ9 985 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 GAREM2Q75VX8 874 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ALYREFQ86V81 257 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 LONP2Q86WA8 852 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 MFN1Q8IWA4 741 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 TDRD5Q8NAT2 981 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 KLHL23Q8NBE8 558 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 FIBINQ8TAL6 211 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ALG14Q96F25 216 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 RAD9AQ99638 391 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 TRMOQ9BU70 441 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ASAH2Q9NR71 780 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 LHX3Q9UBR4 397 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 STK38LQ9Y2H1 464 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 ARL5AQ9Y689 179 aa14.8□□□□□ -0.04
ECHDC1-220ENST00000528402 GOLGA8QA0A0J9YX86 632 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 GOLGA8OA6NCC3 632 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 GOLGA8NF8WBI6 632 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 TK2O00142 265 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 MATN2O00339 956 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 SLC22A2O15244 555 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 FZD6O60353 706 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 GLUD1P00367 558 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 LINC00271P0C7V0 271 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC166P0CW27 439 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CCND1P24385 295 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 PPARGP37231 505 aaPredicted RBP14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 RGRP47804 291 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CLCN4P51793 760 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 NAGLUP54802 743 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 UBE3AQ05086 875 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 TUBB3Q13509 450 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CSHL1Q14406 222 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 DNAL1Q4LDG9 190 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 TECRLQ5HYJ1 363 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 RBM20Q5T481 1227 aaKnown RBP14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 PSRC1Q6PGN9 363 aaPredicted RBP14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 NAPRTQ6XQN6 538 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 SP7Q8TDD2 431 aaPredicted RBP14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 DDI1Q8WTU0 396 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 ASB2Q96Q27 587 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 SLC22A12Q96S37 553 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC28BQ9BUN5 200 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC68Q9H2F9 335 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 COG4Q9H9E3 785 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 MAGEE1Q9HCI5 957 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 BAIAP2L1Q9UHR4 511 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 VPS51Q9UID3 782 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 ARHGAP26Q9UNA1 814 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 KCTD3Q9Y597 815 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 HTTP42858 3142 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 ANKRD36A6QL64 1941 aa14.79□□□□□ -0.04
ECHDC1-220ENST00000528402 TRPC5OSA6NMA1 111 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 GOLGA8CPA6NN73 597 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 GSC2O15499 205 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 NDUFS3O75489 264 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 IPO13O94829 963 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 LMNAP02545 664 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 PYGLP06737 847 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 TFEBP19484 476 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 MZF1P28698 734 aaPredicted RBP14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 BMPR1AP36894 532 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 CSKP41240 450 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 GLRBP48167 497 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 TTPAP49638 278 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 FPGSQ05932 587 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 DLG1Q12959 904 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF789Q5FWF6 425 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms