RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 OR1E3Q8WZA6 343 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 MAML1Q92585 1016 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 PDXPQ96GD0 296 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 CRELD1Q96HD1 420 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 IL12RB2Q99665 862 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 SLC13A1Q9BZW2 595 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 USP29Q9HBJ7 922 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 FGF22Q9HCT0 170 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 NT5MQ9NPB1 228 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 ABHD10Q9NUJ1 306 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 SPTLC3Q9NUV7 552 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 UVRAGQ9P2Y5 699 aa10.47□□□□□ -0.73
PRPF40B-204ENST00000527253 PTPRQQ9UMZ3 2332 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 A0A087WV48 116 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 NPIPB15A6NHN6 443 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 CBFA2T2O43439 604 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 FZD6O60353 706 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 BRINP1O60477 761 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 MFAP3LO75121 409 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 SOCS5O75159 536 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 HEXIM1O94992 359 aaKnown RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PGLSO95336 258 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 CPP00450 1065 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 FUCA1P04066 466 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ANXA6P08133 673 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ALPIP09923 528 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ELFN1P0C7U0 828 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 CTPS1P17812 591 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 KDELR1P24390 212 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 VIPR1P32241 457 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 MAN1A1P33908 653 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 SERPINB6P35237 376 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 GARSP41250 739 aaKnown RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 KIAA1024LP59773 190 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 DSC2Q02487 901 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 NIPAL4Q0D2K0 466 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 TBX2Q13207 712 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 TRIM14Q14142 442 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 MESDQ14696 234 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ACOX1Q15067 660 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PDK2Q15119 407 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 NR0B2Q15466 257 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PNCKQ6P2M8 343 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 TSPAN33Q86UF1 283 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ARRDC2Q8TBH0 407 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 MAPK15Q8TD08 544 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 CTNNBL1Q8WYA6 563 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 NXPE2Q96DL1 559 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 WDR92Q96MX6 357 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 TSGA13Q96PP4 275 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 MCCC1Q96RQ3 725 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 SEMA3CQ99985 751 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 ZNF670Q9BS34 389 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 KLQ9UEF7 1012 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 RABGEF1Q9UJ41 708 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PADI4Q9UM07 663 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PHTF1Q9UMS5 762 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 PPIL1Q9Y3C6 166 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 DGKBQ9Y6T7 804 aa10.46□□□□□ -0.73
PRPF40B-204ENST00000527253 LAMA5O15230 3695 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 KIF26BQ2KJY2 2108 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 PMS2P1A4D2B8 440 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 MATN3O15232 486 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 AKR1B10O60218 316 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 RASGRP1O95267 797 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 PRLP01236 227 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 TPM3P06753 285 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 HOXC4P09017 264 aaPredicted RBP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ITPKBP27987 946 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 HTR1BP28222 390 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ETV3P41162 512 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ISXQ2M1V0 245 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 RALGPS1Q5JS13 557 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ESRP1Q6NXG1 681 aaKnown RBP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 TECPR1Q7Z6L1 1165 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 LRRC49Q8IUZ0 686 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 FSTL5Q8N475 847 aaPredicted RBP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 PAF1Q8N7H5 531 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 PLD5Q8N7P1 536 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 KYQ8NBH2 561 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 OR56A4Q8NGH8 313 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 CCL4L1Q8NHW4 92 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 SCRN2Q96FV2 425 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 RBM15Q96T37 977 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 ABCG4Q9H172 646 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 RBM22Q9NW64 420 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 SIRPGQ9P1W8 387 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 GULP1Q9UBP9 304 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 RAI2Q9Y5P3 530 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 IGSF10Q6WRI0 2623 aa10.45□□□□□ -0.74
PRPF40B-204ENST00000527253 A0A1W2PQ67 120 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 CACNB4O00305 520 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms