RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 H7C0C1 242 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 I6L893 689 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 AP3B1O00203 1094 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 NPC1O15118 1278 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 MATN3O15232 486 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CHADO15335 359 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 LINC01565O15544 149 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HOXC11O43248 304 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RASA4O43374 803 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 KDELR3O43731 214 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PRICKLE3O43900 615 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 OPHN1O60890 802 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GCATO75600 419 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 NEBLO76041 1014 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RHOCP08134 193 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GOLGA6DP0CG33 693 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RBP3P10745 1247 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 IRF1P10914 325 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GLULP15104 373 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GJA1P17302 382 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 KCNA5P22460 613 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CCNCP24863 283 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SLC6A4P31645 630 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HSPA9P38646 679 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 EIF2DP41214 584 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GARSP41250 739 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ATP5OP48047 213 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PLK1P53350 603 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 DYNLT1P63172 113 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 YBX1P67809 324 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RBM10P98175 930 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CDK16Q00536 496 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SLC7A5Q01650 507 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 DR1Q01658 176 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 OTUD4Q01804 1114 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PFKPQ01813 784 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GNA12Q03113 381 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CAV1Q03135 178 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PPIDQ08752 370 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GALNT2Q10471 571 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CUL1Q13616 776 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HNRNPDQ14103 355 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PPP1R7Q15435 360 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SIX1Q15475 284 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 OASLQ15646 514 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SMAD2Q15796 467 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 P3H1Q32P28 736 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RAB6CQ53S08 254 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 INO80DQ53TQ3 878 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 STXBP5Q5T5C0 1151 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 FAM72AQ5TYM5 149 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ARMC3Q5W041 872 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 NCBP2-AS2Q69YL0 99 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HEATR6Q6AI08 1181 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ITPRIPL1Q6GPH6 555 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 FAM72DQ6L9T8 149 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RETSATQ6NUM9 610 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 C8orf74Q6P047 294 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CCDC137Q6PK04 289 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GSTA5Q7RTV2 222 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PCGF5Q86SE9 256 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 C14orf80Q86SX3 495 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 FAM72BQ86X60 149 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 MFN1Q8IWA4 741 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 BBS7Q8IWZ6 715 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 IFT20Q8IY31 132 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CCDC13Q8IYE1 715 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 TMEFF1Q8IYR6 380 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ATPAF2Q8N5M1 289 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ALLCQ8N6M5 410 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 KDM1BQ8NB78 822 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SLC16A11Q8NCK7 471 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 CCNYQ8ND76 341 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 FIBINQ8TAL6 211 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 WFIKKN2Q8TEU8 576 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 MZB1Q8WU39 189 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 C1orf54Q8WWF1 131 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HTR3CQ8WXA8 447 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ING5Q8WYH8 240 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 IGSF8Q969P0 613 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 HDAC11Q96DB2 347 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 ANAPC16Q96DE5 110 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RTP4Q96DX8 246 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 MSANTD3Q96H12 275 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 SEC16BQ96JE7 1060 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 OLFM3Q96PB7 478 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 QKIQ96PU8 341 aaKnown RBP eCLIP3.89□□□□□ -1.796e-11■■■■■ 40.2
C11orf54-204ENST00000527003 KRT12Q99456 494 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 TRMT61BQ9BVS5 477 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 BBS2Q9BXC9 721 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 AP1M1Q9BXS5 423 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 FRMD8Q9BZ67 464 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RAB6CQ9H0N0 254 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 PCDH9Q9HC56 1237 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 TNFRSF12AQ9NP84 129 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RRAGDQ9NQL2 400 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 RBM12Q9NTZ6 932 aaKnown RBP3.89□□□□□ -1.79
C11orf54-204ENST00000527003 GOLGA6AQ9NYA3 693 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 DTLQ9NZJ0 730 aa3.89□□□□□ -1.79
C11orf54-204ENST00000527003 WHRNQ9P202 907 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms