RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 TMEM25Q86YD3 366 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 TREML1Q86YW5 311 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 LRRC49Q8IUZ0 686 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CDKN2AIPNLQ96HQ2 116 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CDK5RAP1Q96SZ6 601 aaKnown RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 BBS2Q9BXC9 721 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 ILKAPQ9H0C8 392 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 AIM2O14862 343 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 ZBTB14O43829 449 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 TRIM16O95361 564 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 ZDHHC11BP0C7U3 371 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 T-ENOLP0DO92 83 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 EPCAMP16422 314 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CD70P32970 193 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 RASSF2P50749 326 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 SLC25A3Q00325 362 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 OCRLQ01968 901 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CYTH1Q15438 398 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 LACTB2Q53H82 288 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 TMEM150AQ86TG1 271 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CALML6Q8TD86 181 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 ACMSDQ8TDX5 336 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 ZFYVE19Q96K21 471 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 KLF16Q9BXK1 252 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 IGLV3-10A0A075B6K4 115 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 LDB2O43679 373 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 DLX3O60479 287 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 NDST3O95803 873 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 KCNA5P22460 613 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 MC4RP32245 332 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CCNFP41002 786 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CCR2P41597 374 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 SEMA3AQ14563 771 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CCDC153Q494R4 210 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 SLC9B1Q4ZJI4 515 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 SPDYAQ5MJ70 313 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 RINLQ6ZS11 566 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 DDX53Q86TM3 631 aaKnown RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CENPLQ8N0S6 344 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 MDGA1Q8NFP4 955 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 GABPB2Q8TAK5 448 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CATSPER2Q96P56 530 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 GPR22Q99680 433 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 FAM167BQ9BTA0 163 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 CD84Q9UIB8 345 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
PTPRK-216ENST00000524481 C1orf232A0A0U1RR37 186 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CRTAMO95727 393 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CYBBP04839 570 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TRAF2Q12933 501 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CLEC6AQ6EIG7 209 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 FAM109BQ6ICB4 259 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CILP2Q8IUL8 1156 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 MAPK15Q8TD08 544 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 OR52B2Q96RD2 323 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 DDX50Q9BQ39 737 aaKnown RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 ZDHHC6Q9H6R6 413 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 NCKIPSDQ9NZQ3 722 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 ZDHHC2Q9UIJ5 367 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CHD9Q3L8U1 2897 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TRAV19A0A0A6YYK7 116 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 ANKRD66B4E2M5 251 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 C9JVG2 144 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 KDELR3O43731 214 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 NIPSNAP2O75323 286 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 CRCPO75575 148 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 GUCA1CO95843 209 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 IGLV3-27P01718 113 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 F11P03951 625 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 JUNP05412 331 aaKnown RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 ATXN1LP0C7T5 689 aaKnown RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TCN1P20061 433 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-216ENST00000524481 HTR7P34969 479 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 PGM1P36871 562 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TRIM68Q6AZZ1 485 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 LAYNQ6UX15 382 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TIFABQ6ZNK6 161 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 BRSK1Q8TDC3 778 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 PSKH2Q96QS6 385 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 HBEGFQ99075 208 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 PLA2G4CQ9UP65 541 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 INSL6Q9Y581 213 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 MYO16Q9Y6X6 1858 aa11.78□□□□□ -0.52
PTPRK-216ENST00000524481 SUPT3HB4E1H0 165 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 G3V2L1 256 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 PPP6CO00743 305 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 SUPT3HO75486 399 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 LUC7L3O95232 432 aaKnown RBP11.77□□□□□ -0.52
PTPRK-216ENST00000524481 BAG2O95816 211 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 GSRP00390 522 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 CD1EP15812 388 aa11.77□□□□□ -0.52
PTPRK-216ENST00000524481 AFMIDQ63HM1 303 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms