RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FAM208BQ5VWN6 2430 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 ZNF487B1APH4 448 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 YY2O15391 372 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 FZD6O60353 706 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 PGLSO95336 258 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 CPP00450 1065 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 TSHRP16473 764 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 MX2P20592 715 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 CES1P23141 567 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 VIPR1P32241 457 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 GBE1Q04446 702 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
SQLE-205ENST00000521232 ALG11Q2TAA5 492 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 ALG1LQ6GMV1 187 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 VSIG1Q86XK7 387 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 SDR16C5Q8N3Y7 309 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 FSTL5Q8N475 847 aaPredicted RBP17.1■□□□□ 0.33
SQLE-205ENST00000521232 ATL2Q8NHH9 583 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 PIH1D2Q8WWB5 315 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 TSACCQ96A04 125 aaPredicted RBP17.1■□□□□ 0.33
SQLE-205ENST00000521232 FUBP1Q96AE4 644 aaKnown RBP17.1■□□□□ 0.33
SQLE-205ENST00000521232 SEMA3CQ99985 751 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 NRSN2Q9GZP1 204 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 POLR1EQ9GZS1 481 aaKnown RBP17.1■□□□□ 0.33
SQLE-205ENST00000521232 KCTD5Q9NXV2 234 aa17.1■□□□□ 0.33
SQLE-205ENST00000521232 LRP4O75096 1905 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ITPR1Q14643 2758 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 EME2A4GXA9 379 aaPredicted RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 OPA1O60313 960 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 RASGRP1O95267 797 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 MAP3K6O95382 1288 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 MT-CO3P00414 261 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ANXA6P08133 673 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 CYP2A6P11509 494 aaPredicted RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 KIAA1024LP59773 190 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 SRP54P61011 504 aaKnown RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 ACOX1Q15067 660 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ELOCQ15369 112 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 CNGA3Q16281 694 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 C6orf132Q5T0Z8 1188 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ARMC12Q5T9G4 340 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 CDCP2Q5VXM1 449 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 PNCKQ6P2M8 343 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 LVRNQ6Q4G3 990 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 HID1Q8IV36 788 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 IFI44Q8TCB0 444 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 GLMNQ92990 594 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 WDR92Q96MX6 357 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 MCCC1Q96RQ3 725 aaPredicted RBP17.09■□□□□ 0.33
SQLE-205ENST00000521232 TRIM5Q9C035 493 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 RBM22Q9NW64 420 aaKnown RBP eCLIP17.09■□□□□ 0.33
SQLE-205ENST00000521232 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 DGKBQ9Y6T7 804 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 ZFYVE26Q68DK2 2539 aa17.09■□□□□ 0.33
SQLE-205ENST00000521232 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.32
SQLE-205ENST00000521232 PSMD11O00231 422 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 CACNB4O00305 520 aaPredicted RBP17.08■□□□□ 0.32
SQLE-205ENST00000521232 TNFP01375 233 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 PDHA1P08559 390 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 ALPIP09923 528 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 CTSEP14091 401 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 CCNB1P14635 433 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 SLC1A1P43005 524 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 ITKQ08881 620 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 IHHQ14623 411 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 RTP5Q14D33 572 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 NR0B2Q15466 257 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 CDKN3Q16667 212 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 TPCN2Q8NHX9 752 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 HDAC11Q96DB2 347 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 HAUS2Q9NVX0 235 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 KLQ9UEF7 1012 aa17.08■□□□□ 0.32
SQLE-205ENST00000521232 CPED1A4D0V7 1026 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 LRRD1A4D1F6 860 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 TMEM202A6NGA9 273 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
SQLE-205ENST00000521232 TNFRSF10CO14798 259 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 CELA2BP08218 269 aaPredicted RBP17.07■□□□□ 0.32
SQLE-205ENST00000521232 LHCGRP22888 699 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 KELP23276 732 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 RPIAP49247 311 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 SLC9A4Q6AI14 798 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 GUSBP11Q6P575 273 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 RD3Q7Z3Z2 195 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 SLC35F3Q8IY50 421 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 CCDC13Q8IYE1 715 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 NDUFAF2Q8N183 169 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 PELI3Q8N2H9 469 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 PLD5Q8N7P1 536 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 OR56A4Q8NGH8 313 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 ARRDC2Q8TBH0 407 aa17.07■□□□□ 0.32
SQLE-205ENST00000521232 SCG3Q8WXD2 468 aaKnown RBP17.07■□□□□ 0.32
SQLE-205ENST00000521232 NXPE2Q96DL1 559 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms