RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PLK2Q9NYY3 685 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CLEC4EQ9ULY5 219 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 DNAJC16Q9Y2G8 782 aa14.99□□□□□ -0.01
VCAN-211ENST00000513984 C2orf81A6NN90 581 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 CYBBP04839 570 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 ATP5BP06576 529 aaKnown RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 RHOP08100 348 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 HNRNPA1P09651 372 aaKnown RBP eCLIP14.98□□□□□ -0.01
VCAN-211ENST00000513984 SERPINB3P29508 390 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 IRS1P35568 1242 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 SEMA3AQ14563 771 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 TEAD2Q15562 447 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 CTC1Q2NKJ3 1217 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 PLEKHG6Q3KR16 790 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 ARHGAP15Q53QZ3 475 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 LIPMQ5VYY2 423 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 FAM91A1Q658Y4 838 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 FAM45BPQ6NSW5 357 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 AFTPHQ6ULP2 937 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 ATG14Q6ZNE5 492 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 ASRGL1Q7L266 308 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 TBC1D1Q86TI0 1168 aaPredicted RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 LDB1Q86U70 411 aaPredicted RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 WDR75Q8IWA0 830 aaKnown RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 OR4K2Q8NGD2 314 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 TTC8Q8TAM2 541 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 FAM45AQ8TCE6 357 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 USP13Q92995 863 aaPredicted RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 SCYL1Q96KG9 808 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 LMLNQ96KR4 655 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 STN1Q9H668 368 aaKnown RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 SAR1AQ9NR31 198 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 IGSF5Q9NSI5 407 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 HACD3Q9P035 362 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 CPSF2Q9P2I0 782 aaKnown RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 XPR1Q9UBH6 696 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 MARCOQ9UEW3 520 aaPredicted RBP14.98□□□□□ -0.01
VCAN-211ENST00000513984 VWA7Q9Y334 891 aa14.98□□□□□ -0.01
VCAN-211ENST00000513984 PDE4DIPQ5VU43 2346 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 K7ERQ8 282 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 GRM6O15303 877 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 RB1P06400 928 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 KITP10721 976 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 SYN1P17600 705 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 LPOP22079 712 aaPredicted RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 CD70P32970 193 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 GLRBP48167 497 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 CSNK1DP48730 415 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 STC1P52823 247 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 AQP5P55064 265 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 ATXN7L2Q5T6C5 722 aaPredicted RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 NAPRTQ6XQN6 538 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 SPRED2Q7Z698 418 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 PNPLA1Q8N8W4 532 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 RIN3Q8TB24 985 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 MICAL1Q8TDZ2 1067 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 UBXN10Q96LJ8 280 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 MRPL57Q9BQC6 102 aaKnown RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 MRPL46Q9H2W6 279 aaKnown RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 FAM96AQ9H5X1 160 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 ABCB8Q9NUT2 735 aa14.97□□□□□ -0.01
VCAN-211ENST00000513984 INTS10Q9NVR2 710 aaKnown RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 INTS6Q9UL03 887 aaKnown RBP14.97□□□□□ -0.01
VCAN-211ENST00000513984 SMAD6O43541 496 aaKnown RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 RASSF9O75901 435 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 ARHGEF15O94989 841 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 ALOX15P16050 662 aaPredicted RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 EPCAMP16422 314 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 FDXRP22570 491 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SLC26A3P40879 764 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 MAPK8P45983 427 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 GRIA4P48058 902 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SLC20A2Q08357 652 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 FAM83EQ2M2I3 478 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SLC5A9Q2M3M2 681 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SDCCAG8Q86SQ7 713 aaPredicted RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 TTC30BQ8N4P2 665 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 HEXDCQ8WVB3 486 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SMIM14Q96QK8 99 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 GATA5Q9BWX5 397 aaPredicted RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 MCOLN1Q9GZU1 580 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 GPAMQ9HCL2 828 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SLC40A1Q9NP59 571 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 XYLBO75191 536 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 PGLSO95336 258 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 PENKP01210 267 aaPredicted RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 LTA4HP09960 611 aaKnown RBP14.96□□□□□ -0.01
VCAN-211ENST00000513984 T-ENOLP0DO92 83 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 SLC8A1P32418 973 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 CDKN2DP55273 166 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 ZBTB16Q05516 673 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 CSHL1Q14406 222 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 TECRLQ5HYJ1 363 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 PRSS36Q5K4E3 855 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 AGAP9Q5VTM2 703 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 ZNF549Q6P9A3 640 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 PDCD6IPQ8WUM4 868 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms