RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SMARCE1Q969G3 411 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 CFAP57Q96MR6 1250 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 DPYSL5Q9BPU6 564 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 NCAPGQ9BPX3 1015 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 LGR4Q9BXB1 951 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 SCAND2PQ9GZW5 306 aaPredicted RBP10.98□□□□□ -0.65
DDX41-216ENST00000513562 SUV39H2Q9H5I1 410 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 WDR26Q9H7D7 661 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 PRDM8Q9NQV8 689 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 CUEDC1Q9NWM3 386 aaPredicted RBP10.98□□□□□ -0.65
DDX41-216ENST00000513562 TMEM9Q9P0T7 183 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 TAAR2Q9P1P5 351 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 PDP2Q9P2J9 529 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 TMEM59LQ9UK28 342 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 ATP8A1Q9Y2Q0 1164 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 KCNMB2Q9Y691 235 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 ITPR2Q14571 2701 aa10.98□□□□□ -0.65
DDX41-216ENST00000513562 CSMD1Q96PZ7 3565 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 FAM72CH0Y354 149 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 LRIG2O94898 1065 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 PRKCGP05129 697 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 GM2AP17900 193 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 TCN2P20062 427 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 CDH5P33151 784 aaPredicted RBP10.97□□□□□ -0.65
DDX41-216ENST00000513562 ILF3Q12906 894 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDX41-216ENST00000513562 RALGDSQ12967 914 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 GRM3Q14832 879 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 ATP1A1-AS1Q5TC04 95 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 FAM72AQ5TYM5 149 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 FAM72DQ6L9T8 149 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 TMEM71Q6P5X7 295 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 BRAT1Q6PJG6 821 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 ARCQ7LC44 396 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 SLC47A2Q86VL8 602 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 FAM72BQ86X60 149 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 ZSWIM9Q86XI8 627 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 CCDC13Q8IYE1 715 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 NRSN1Q8IZ57 195 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 PATE1Q8WXA2 126 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 C18orf8Q96DM3 657 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 EXOC2Q96KP1 924 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 ZNF641Q96N77 438 aaPredicted RBP10.97□□□□□ -0.65
DDX41-216ENST00000513562 CRACR2AQ9BSW2 395 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 GSDMCQ9BYG8 508 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 NOL6Q9H6R4 1146 aaKnown RBP10.97□□□□□ -0.65
DDX41-216ENST00000513562 CARS2Q9HA77 564 aaKnown RBP10.97□□□□□ -0.65
DDX41-216ENST00000513562 LHX3Q9UBR4 397 aa10.97□□□□□ -0.65
DDX41-216ENST00000513562 TMEM184BQ9Y519 407 aaPredicted RBP10.97□□□□□ -0.65
DDX41-216ENST00000513562 LRBAP50851 2863 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 SPTBN1Q01082 2364 aaKnown RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 LRRK1Q38SD2 2015 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 BICDL2A1A5D9 508 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 MKRN2OSH3BPM6 223 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 PPM1DO15297 605 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 SEMA7AO75326 666 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 MYCLP1P12525 358 aaPredicted RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 SLC9A1P19634 815 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 MAN1A1P33908 653 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 ADRA1BP35368 520 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CLCN1P35523 988 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 STAT5AP42229 794 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 COPB1P53618 953 aaKnown RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 GPLD1P80108 840 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 MC2RQ01718 297 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 BIRC2Q13490 618 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CYTH1Q15438 398 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 RAB6CQ53S08 254 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CFAP58Q5T655 872 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 KLHL10Q6JEL2 608 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CEACAM20Q6UY09 585 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 ASB18Q6ZVZ8 466 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 HEATR4Q86WZ0 1026 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 ZNF354CQ86Y25 554 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 DNAAF5Q86Y56 855 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 NAGSQ8N159 534 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 PELI3Q8N2H9 469 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 NELFBQ8WX92 580 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 TBC1D31Q96DN5 1066 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CTRCQ99895 268 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 ZPBPQ9BS86 351 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 KLC2Q9H0B6 622 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 RAB6CQ9H0N0 254 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 TRIT1Q9H3H1 467 aaKnown RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 TRNAU1APQ9NX07 287 aaKnown RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 MOSPD1Q9UJG1 213 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 AJAP1Q9UKB5 411 aaPredicted RBP10.96□□□□□ -0.65
DDX41-216ENST00000513562 ZDHHC9Q9Y397 364 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 ST14Q9Y5Y6 855 aa10.96□□□□□ -0.65
DDX41-216ENST00000513562 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 A1L4Q6 167 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 GOLGA8SH3BPF8 625 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 STK17BO94768 372 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 DLGAP3O95886 979 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms