RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 C8orf74Q6P047 294 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 NEK5Q6P3R8 708 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 MAATS1Q7Z4T9 603 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LINC00523Q86TU6 105 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TTC7BQ86TV6 843 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 FAM124AQ86V42 546 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TAB3Q8N5C8 712 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LPCAT1Q8NF37 534 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 OR2T34Q8NGX1 318 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 OR14C36Q8NHC7 312 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PIH1D2Q8WWB5 315 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 RLN3Q8WXF3 142 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TOE1Q96GM8 510 aaKnown RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 MCCC1Q96RQ3 725 aaPredicted RBP7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 LYSMD1Q96S90 227 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TBL1YQ9BQ87 522 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 FICDQ9BVA6 458 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PCED1AQ9H1Q7 454 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 L2HGDHQ9H9P8 463 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ETNK1Q9HBU6 452 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDH12Q9NPG4 1184 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 ASIC3Q9UHC3 531 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 FADS3Q9Y5Q0 445 aa7.62□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3DA0A087WVF3 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3IA0A087WXS9 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3EA0A087X179 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3KA0A087X1G2 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3FA6NER0 549 aaPredicted RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 EFCAB8A8MWE9 144 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3LB9A6J9 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 H0Y858 1186 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 PSMD11O00231 422 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 NEMP1O14524 444 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 DNALI1O14645 258 aaPredicted RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 NDC80O14777 642 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 SPINT1O43278 529 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 RAD51CO43502 376 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 LILRB5O75023 590 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 SUN1O94901 812 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDH8O95206 1070 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ALPIP09923 528 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ATXN1LP0C7T5 689 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ELFN1P0C7U0 828 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3HP0C7X1 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 BCKDHBP21953 392 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 VIPR1P32241 457 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ADRA1AP35348 466 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 MAGEA6P43360 314 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 CHRNA4P43681 627 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 RPL6Q02878 288 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 RALGDSQ12967 914 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ARHGEF7Q14155 803 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 KCNJ11Q14654 390 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TMEM52BQ4KMG9 183 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 SPDYCQ5MJ68 293 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3GQ6DHY5 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3CQ6IPX1 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 KIAA1161Q6NSJ0 714 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 RANBP10Q6VN20 620 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 DPPA4Q7L190 304 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 KDELC2Q7Z4H8 507 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 PCGF5Q86SE9 256 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TRIM69Q86WT6 500 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TBC1D3Q8IZP1 549 aaPredicted RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 MMGT1Q8N4V1 131 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 FRMD1Q8N878 549 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 FOXJ1Q92949 421 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 SCRN2Q96FV2 425 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 SRPK1Q96SB4 655 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 TRIM51Q9BSJ1 452 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 CARD6Q9BX69 1037 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 GPR174Q9BXC1 333 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 RAB17Q9H0T7 212 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ARNT2Q9HBZ2 717 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 HACD3Q9P035 362 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 MAP10Q9P2G4 905 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 B4GALT6Q9UBX8 382 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 ITM2BQ9Y287 266 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 UTP11Q9Y3A2 253 aaKnown RBP7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 CABIN1Q9Y6J0 2220 aa7.61□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDH15Q96QU1 1955 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PRR23AA6NEV1 266 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 NPIPB15A6NHN6 443 aaPredicted RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 FAM47DPA6NHR8 397 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 MEI4A8MW99 385 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 C10orf142B7Z368 130 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 AP3B1O00203 1094 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 LATO43561 262 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 RNGTTO60942 597 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 USP12O75317 370 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 TM7SF2O76062 418 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 HEXIM1O94992 359 aaKnown RBP7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 AGTP01019 485 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 PRKCGP05129 697 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 CTPS1P17812 591 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 LHCGRP22888 699 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 NUDT1P36639 197 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 ADCY8P40145 1251 aa7.6□□□□□ -1.19
HMGXB3-204ENST00000513318 RPIAP49247 311 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms